RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 G3V2T6 193 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 RRP9O43818 475 aaKnown RBP10.23□□□□□ -0.77
VEGFA-216ENST00000512683 NOS1APO75052 506 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF254O75437 659 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 SRSF10O75494 262 aaKnown RBP10.23□□□□□ -0.77
VEGFA-216ENST00000512683 MTRF1O75570 445 aaKnown RBP10.23□□□□□ -0.77
VEGFA-216ENST00000512683 IGLV3-1P01715 115 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 FAHP16930 419 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 LGALS4P56470 323 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 RIPPLY1Q0D2K3 151 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 SAMD5Q5TGI4 173 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 KDM4DQ6B0I6 523 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 HCP5Q6MZN7 132 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 KCTD18Q6PI47 426 aaPredicted RBP10.23□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF561Q8N587 486 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 OR4S1Q8NGB4 309 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 PPP1R35Q8TAP8 253 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 FAM81AQ8TBF8 368 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 AJUBAQ96IF1 538 aa10.23□□□□□ -0.77
VEGFA-216ENST00000512683 TMEM269A0A1B0GVZ9 245 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PRD5 423 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PRF3 423 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 A0A1W2PRM7 423 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 ZAR1LA6NP61 321 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF732B4DXR9 585 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 H3BUI4 141 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 GPM6AP51674 278 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 RPL31P62899 125 aaKnown RBP10.22□□□□□ -0.77
VEGFA-216ENST00000512683 KLRD1Q13241 179 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 SMIM21Q3B7S5 101 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 AADACL4Q5VUY2 407 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 SLX4IPQ5VYV7 408 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 MEPCEQ7L2J0 689 aaKnown RBP10.22□□□□□ -0.77
VEGFA-216ENST00000512683 THAP5Q7Z6K1 395 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 AMIGO2Q86SJ2 522 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 C1QL4Q86Z23 238 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF679Q8IYX0 411 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 Q8N2B8 174 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 TCEANCQ8N8B7 351 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 ZNRF1Q8ND25 227 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 AQP3Q92482 292 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 OR8B4Q96RC9 309 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 MROQ9BYG7 248 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 TTTY10Q9BZA0 68 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 PBOV1Q9GZY1 135 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 GABARAPL1Q9H0R8 117 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 KRT84Q9NSB2 600 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 PITPNC1Q9UKF7 332 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 AP4S1Q9Y587 144 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 TMEM14AQ9Y6G1 99 aa10.22□□□□□ -0.77
VEGFA-216ENST00000512683 FAM90A8PA6NJQ4 464 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 SLC1A7O00341 560 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 MAGEB4O15481 346 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ANGPTL7O43827 346 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 RHBDL1O75783 438 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 RBP4P02753 201 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 TTRP02766 147 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 TFF1P04155 84 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 SELLP14151 372 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 PRDX2P32119 198 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ERVFRD-1P60508 538 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 GMFBP60983 142 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ACTR3P61158 418 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 MFGE8Q08431 387 aaPredicted RBP10.21□□□□□ -0.77
VEGFA-216ENST00000512683 DMRTC1Q5HYR2 192 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 NXNL2Q5VZ03 156 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 TMEM200BQ69YZ2 307 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ZNF573Q86YE8 665 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 PNKDQ8N490 385 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 C11orf42Q8N5U0 333 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 POC1AQ8NBT0 407 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 TMEM185AQ8NFB2 350 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 TMEM163Q8TC26 289 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 OR51E1Q8TCB6 317 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ASB17Q8WXJ9 295 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 MALSU1Q96EH3 234 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 IL4I1Q96RQ9 567 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 CNN2Q99439 309 aaKnown RBP10.21□□□□□ -0.77
VEGFA-216ENST00000512683 APOL4Q9BPW4 351 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ADGRL4Q9HBW9 690 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 GPR84Q9NQS5 396 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 USE1Q9NZ43 259 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 ENPP5Q9UJA9 477 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 POLDIP2Q9Y2S7 368 aa10.21□□□□□ -0.77
VEGFA-216ENST00000512683 RFPL4AA6NLU0 287 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 RFPL4AL1F8VTS6 287 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 G3V4G9 280 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 ATP5HO75947 161 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 FASP25445 335 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 POLR2IP36954 125 aaKnown RBP10.2□□□□□ -0.78
VEGFA-216ENST00000512683 RASSF2P50749 326 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 DYNLT3P51808 116 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 RIDAP52758 137 aaKnown RBP10.2□□□□□ -0.78
VEGFA-216ENST00000512683 CAPZA1P52907 286 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 CXCR4P61073 352 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 CEP78Q5JTW2 689 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 C1orf146Q5VVC0 180 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 ACP7Q6ZNF0 438 aa10.2□□□□□ -0.78
VEGFA-216ENST00000512683 NDUFA11Q86Y39 141 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms