RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 OR51T1Q8NGJ9 327 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 OR8S1Q8NH09 359 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 OR51F2Q8NH61 342 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 RNF170Q96K19 258 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 OR51B6Q9H340 312 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 NKIRAS2Q9NYR9 191 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 HSF4Q9ULV5 492 aa13.02□□□□□ -0.32
SCLT1-209ENST00000511426 SVILO95425 2214 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 LRP5LA4QPB2 252 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 FOXI3A8MTJ6 420 aaPredicted RBP13.02□□□□□ -0.33
SCLT1-209ENST00000511426 ZNF732B4DXR9 585 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 ZNF250P15622 560 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 TBPP20226 339 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 RCVRNP35243 200 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 PMELP40967 661 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 HAAOP46952 286 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 NKX6-1P78426 367 aaPredicted RBP13.02□□□□□ -0.33
SCLT1-209ENST00000511426 MOGAT2Q3SYC2 334 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 LINC00596Q86U02 117 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 Q8IYB0 196 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 CHST4Q8NCG5 386 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 SEH1LQ96EE3 360 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 SELENOIQ9C0D9 397 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 DPAGT1Q9H3H5 408 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 BANF2Q9H503 90 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 TMEM100Q9NV29 134 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 NPAP1Q9NZP6 1156 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 KLK11Q9UBX7 282 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 OSGIN2Q9Y236 505 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 POLDIP2Q9Y2S7 368 aa13.02□□□□□ -0.33
SCLT1-209ENST00000511426 NCOR2Q9Y618 2525 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 J3QT63 122 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 MFNGO00587 321 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 ACAA1P09110 424 aaPredicted RBP13.01□□□□□ -0.33
SCLT1-209ENST00000511426 CA6P23280 308 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 CD40P25942 277 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 GPM6AP51674 278 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 SORDQ00796 357 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 TMEM229BQ8NBD8 167 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 BHLHE23Q8NDY6 225 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 CREB3L1Q96BA8 519 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 PPP1R14BQ96C90 147 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 CCDC120Q96HB5 630 aa13.01□□□□□ -0.33
SCLT1-209ENST00000511426 ADAT1Q9BUB4 502 aaKnown RBP13.01□□□□□ -0.33
SCLT1-209ENST00000511426 MYEF2Q9P2K5 600 aaKnown RBP13.01□□□□□ -0.33
SCLT1-209ENST00000511426 LINC00854A0A1B0GVQ3 168 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 TIMM8AO60220 97 aaPredicted RBP13□□□□□ -0.33
SCLT1-209ENST00000511426 HTR3BO95264 441 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 KIR2DL3P43628 341 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 RAG2P55895 527 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 TAS2R19P59542 299 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 SELENOVP59797 346 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 FGF12P61328 243 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 ERVS71-1P61550 626 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 PCGF3Q3KNV8 242 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 SLC25A26Q70HW3 274 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 CALHM1Q8IU99 346 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 OR13G1Q8NGZ3 307 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 LILRB4Q8NHJ6 448 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 RNASE6Q93091 150 aaKnown RBP13□□□□□ -0.33
SCLT1-209ENST00000511426 NICN1Q9BSH3 213 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 OR51I2Q9H344 312 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 LAMA5O15230 3695 aa13□□□□□ -0.33
SCLT1-209ENST00000511426 IGLV3-9A0A075B6K5 115 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 A0A0A6YYD4 124 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 A0A1W2PP11 408 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 MEIOCA2RUB1 952 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 TMEM235A6NFC5 223 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 TRAPPC2LH3BP13 241 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 SPRY1O43609 319 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 ANGPTL7O43827 346 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 IGHV3-13P01766 116 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 AKAIN1P0CW23 69 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 MPV17P39210 176 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 TMEM50BP56557 158 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 GNG2P59768 71 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 MPV17LQ2QL34 196 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 PLA1AQ53H76 456 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 DMRTC1Q5HYR2 192 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 MARVELD1Q9BSK0 173 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 FGF23Q9GZV9 251 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 ANAPC10Q9UM13 185 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 NUBP2Q9Y5Y2 271 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 IGKV1-12A0A0C4DH73 117 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 FUOMA2VDF0 154 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 IGKV1D-12P01611 117 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 BLVRBP30043 206 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 SRP9P49458 86 aaKnown RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 ZMYND11Q15326 602 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 OR8G1Q15617 311 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 ACTBL2Q562R1 376 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 RNASE12Q5GAN4 147 aaKnown RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 PLAC9Q5JTB6 97 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 GALNT11Q8NCW6 608 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 ST8SIA4Q92187 359 aa12.99□□□□□ -0.33
SCLT1-209ENST00000511426 GCDHQ92947 438 aaPredicted RBP12.99□□□□□ -0.33
SCLT1-209ENST00000511426 RADILQ96JH8 1075 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms