RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 ELL3Q9HB65 397 aaPredicted RBP18.87■□□□□ 0.61
SNF8-209ENST00000510558 A0A1W2PQ09 198 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 POM121CA8CG34 1229 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 SULT1C4O75897 302 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 ALPLP05186 524 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 PGA5P0DJD9 388 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 MDKP21741 143 aaPredicted RBP18.86■□□□□ 0.61
SNF8-209ENST00000510558 DLX1P56177 255 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 KPNB1Q14974 876 aaKnown RBP18.86■□□□□ 0.61
SNF8-209ENST00000510558 LDLRAD3Q86YD5 345 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 TBC1D15Q8TC07 691 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 RORBQ92753 470 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 IMPAD1Q9NX62 359 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 POLDIP2Q9Y2S7 368 aa18.86■□□□□ 0.61
SNF8-209ENST00000510558 RFPL4AA6NLU0 287 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 RFPL4AL1F8VTS6 287 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 RNASEK-C17orf49H0YIS7 233 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 H3BNX3 289 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 M0R1W7 72 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 EI24O14681 340 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 CRYBA1P05813 215 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 GUCA2AQ02747 115 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 KLRD1Q13241 179 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 C1orf122Q6ZSJ8 110 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 CCDC121Q6ZUS5 278 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 UBE2FQ969M7 185 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 PLEKHA1Q9HB21 404 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 USE1Q9NZ43 259 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 ORC6Q9Y5N6 252 aa18.85■□□□□ 0.61
SNF8-209ENST00000510558 ANKRD61A6NGH8 418 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 H3BSH0 61 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 SPRY1O43609 319 aaPredicted RBP18.84■□□□□ 0.61
SNF8-209ENST00000510558 NOS1APO75052 506 aaPredicted RBP18.84■□□□□ 0.61
SNF8-209ENST00000510558 IGHV4-59P01825 116 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 EEF1B2P24534 225 aaKnown RBP18.84■□□□□ 0.61
SNF8-209ENST00000510558 CAPZA1P52907 286 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 ZNF85Q03923 595 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 ZFP1Q6P2D0 407 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 CD177Q8N6Q3 437 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 NPRL2Q8WTW4 380 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 TRUB1Q8WWH5 349 aaKnown RBP18.84■□□□□ 0.61
SNF8-209ENST00000510558 TNFRSF14Q92956 283 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 HRASLS5Q96KN8 279 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.84■□□□□ 0.61
SNF8-209ENST00000510558 FAM96BQ9Y3D0 163 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 MMP24Q9Y5R2 645 aa18.84■□□□□ 0.61
SNF8-209ENST00000510558 TRBV23-1A0A0A0MS06 115 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 A0A1W2PRD5 423 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 A0A1W2PRF3 423 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 A0A1W2PRM7 423 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 SYT7O43581 403 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 NXPH2O95156 264 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 MPZP25189 248 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 IER3P46695 156 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 RAG2P55895 527 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 FAM220AQ7Z4H9 259 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 TRMT10AQ8TBZ6 339 aaKnown RBP18.83■□□□□ 0.6
SNF8-209ENST00000510558 NRIP2Q9BQI9 281 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 METTL8Q9H825 291 aaKnown RBP18.83■□□□□ 0.6
SNF8-209ENST00000510558 C1RLQ9NZP8 487 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 GNG8Q9UK08 70 aa18.83■□□□□ 0.6
SNF8-209ENST00000510558 CAB39Q9Y376 341 aaPredicted RBP18.83■□□□□ 0.6
SNF8-209ENST00000510558 NPFFO15130 113 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 FBP1P09467 338 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 PRDX2P32119 198 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 CEBPDP49716 269 aaPredicted RBP18.82■□□□□ 0.6
SNF8-209ENST00000510558 ISL1P61371 349 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 RELBQ01201 579 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 BLMHQ13867 455 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 ZIK1Q3SY52 487 aaPredicted RBP18.82■□□□□ 0.6
SNF8-209ENST00000510558 TP53I3Q53FA7 332 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 NCR3LG1Q68D85 454 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 ANGPTL5Q86XS5 388 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 CALHM1Q8IU99 346 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 FAM185AQ8N0U4 392 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 BATF2Q8N1L9 274 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 PRSS35Q8N3Z0 413 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 ZNF561Q8N587 486 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 CCDC54Q8NEL0 328 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 OR4F5Q8NH21 305 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 DYRK2Q92630 601 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 ADI1Q9BV57 179 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 SLITRK2Q9H156 845 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 HES4Q9HCC6 221 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 SLC7A11Q9UPY5 501 aa18.82■□□□□ 0.6
SNF8-209ENST00000510558 A0A1B0GUS0 222 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 FAM230AA0A1W2PPH8 454 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 SLC1A7O00341 560 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 ENTPD6O75354 484 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 NDUFA7O95182 113 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 ALDH3A2P51648 485 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 RPL15P61313 204 aaKnown RBP18.81■□□□□ 0.6
SNF8-209ENST00000510558 UBE2V2Q15819 145 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 PKIBQ9C010 78 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 DPAGT1Q9H3H5 408 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 C19orf12Q9NSK7 152 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 ZNRD1Q9P1U0 126 aa18.81■□□□□ 0.6
SNF8-209ENST00000510558 LOC107986453A0A1B0GWG9 222 aa18.8■□□□□ 0.6
SNF8-209ENST00000510558 E9PQ18 207 aa18.8■□□□□ 0.6
SNF8-209ENST00000510558 H0YAE9 185 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms