RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 ZNF671Q8TAW3 534 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 RCC1LQ96I51 464 aaKnown RBP12.86□□□□□ -0.35
CXCL1-202ENST00000509101 NSMCE2Q96MF7 247 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 C1orf21Q9H246 121 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 TAGLN3Q9UI15 199 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 BAIAP2Q9UQB8 552 aa12.86□□□□□ -0.35
CXCL1-202ENST00000509101 MEX3AA1L020 520 aaKnown RBP12.85□□□□□ -0.35
CXCL1-202ENST00000509101 F2RL2O00254 374 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 TNFRSF11BO00300 401 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 ARPC2O15144 300 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 SYNGR1O43759 233 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 LYNP07948 512 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 JUNBP17275 347 aaPredicted RBP12.85□□□□□ -0.35
CXCL1-202ENST00000509101 HOXD3P31249 432 aaPredicted RBP12.85□□□□□ -0.35
CXCL1-202ENST00000509101 CEACAM21Q3KPI0 293 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF770Q6IQ21 691 aaPredicted RBP12.85□□□□□ -0.35
CXCL1-202ENST00000509101 BATF2Q8N1L9 274 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF561Q8N587 486 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 AQP11Q8NBQ7 271 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 POC1AQ8NBT0 407 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 RASL12Q9NYN1 266 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 TAS2R1Q9NYW7 299 aa12.85□□□□□ -0.35
CXCL1-202ENST00000509101 SELENOFO60613 162 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 KRT36O76013 467 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 CCNB2O95067 398 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 PRDX2P32119 198 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 MAP2K3P46734 347 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 DLX6P56179 175 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 PPP1R8Q12972 351 aaKnown RBP12.84□□□□□ -0.35
CXCL1-202ENST00000509101 PLCXD3Q63HM9 321 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 ZNF626Q68DY1 528 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 CCDC197Q8NCU1 140 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 OR13D1Q8NGV5 346 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 THEM6Q8WUY1 208 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 MALSU1Q96EH3 234 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 OCSTAMPQ9BR26 566 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 CMC2Q9NRP2 79 aa12.84□□□□□ -0.35
CXCL1-202ENST00000509101 TCRBV4S1A1TA0A5B7 111 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 OR5B21A6NL26 309 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 C17orf98A8MV24 154 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 HMGA2P52926 109 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 DYNC1I2Q13409 638 aaKnown RBP12.83□□□□□ -0.36
CXCL1-202ENST00000509101 TCTEX1D4Q5JR98 221 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 KHDC1LQ5JSQ8 128 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 MOB3CQ70IA8 216 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 COMMD2Q86X83 199 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 PGAM4Q8N0Y7 254 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 IQCF1Q8N6M8 205 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 OR5A2Q8NGI9 324 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 OTOSQ8NHW6 89 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 CDRT15Q96T59 188 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 B9D2Q9BPU9 175 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 OR51V1Q9H2C8 321 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 NIPAL2Q9H841 368 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 OR14J1Q9UGF5 321 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 KLHDC2Q9Y2U9 406 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 HILPDAQ9Y5L2 63 aa12.83□□□□□ -0.36
CXCL1-202ENST00000509101 TSSC4Q9Y5U2 329 aaPredicted RBP12.83□□□□□ -0.36
CXCL1-202ENST00000509101 E9PQ18 207 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 NXPH2O95156 264 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 DUS4LO95620 317 aaKnown RBP12.82□□□□□ -0.36
CXCL1-202ENST00000509101 TK1P04183 234 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 PGA5P0DJD9 388 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 HSD17B1P14061 328 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 DYNLT3P51808 116 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 OR12D2P58182 307 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 SLC34A1Q06495 639 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 CALHM1Q8IU99 346 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 DEFB107AQ8IZN7 70 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 MYDGFQ969H8 173 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 OR8B4Q96RC9 309 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 INPP5EQ9NRR6 644 aa12.82□□□□□ -0.36
CXCL1-202ENST00000509101 J3QT63 122 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 T-ENOLP0DO92 83 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 HAAOP46952 286 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 EGFEM1PQ0D2K5 195 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 LCN8Q6JVE9 175 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 KRT74Q7RTS7 529 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 TRPM8Q7Z2W7 1104 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 CENPVQ7Z7K6 275 aaPredicted RBP12.81□□□□□ -0.36
CXCL1-202ENST00000509101 ZNF454Q8N9F8 522 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 ASCC1Q8N9N2 400 aaKnown RBP12.81□□□□□ -0.36
CXCL1-202ENST00000509101 OR11H6Q8NGC7 330 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 NSL1Q96IY1 281 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 VNN3Q9NY84 501 aa12.81□□□□□ -0.36
CXCL1-202ENST00000509101 A0A0U1RQV5 110 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 B2RBV5 119 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 CLIC3O95833 236 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 ZNF728P0DKX0 622 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 IGHV1-8P0DP01 117 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 AZGP1P25311 298 aaKnown RBP12.8□□□□□ -0.36
CXCL1-202ENST00000509101 EDDM3BP56851 147 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 ZNF684Q5T5D7 378 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 C10orf99Q6UWK7 81 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 C16orf89Q6UX73 402 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 KRT77Q7Z794 578 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 OR4X2Q8NGF9 303 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 NDNFQ8TB73 568 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 TEX47Q8TBZ9 253 aa12.8□□□□□ -0.36
CXCL1-202ENST00000509101 DPF1Q92782 380 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms