RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 A6NIN4 97 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 C3orf80F5H4A9 247 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 J3QLI3 93 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 NOS1APO75052 506 aaPredicted RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 NXPH2O95156 264 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 LY6G6DO95868 133 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 TGFAP01135 160 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 HCKP08631 526 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 ACAA1P09110 424 aaPredicted RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 ZNF16P17020 682 aaPredicted RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 MPZP25189 248 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 AZGP1P25311 298 aaKnown RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 RANBP1P43487 201 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 BMXP51813 675 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 LMO4P61968 165 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 GNB2P62879 340 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 MLLT11Q13015 90 aaPredicted RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 SCGB2A2Q13296 93 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 IRF3Q14653 427 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 UBE2V2Q15819 145 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 CD276Q5ZPR3 534 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 XAF1Q6GPH4 301 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 ZNF826PQ6ZT77 177 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 ZNF367Q7RTV3 350 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 C11orf53Q8IXP5 236 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 MKXQ8IYA7 352 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 GCSAMQ8N6F7 178 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 PNLDC1Q8NA58 520 aaKnown RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 POC1AQ8NBT0 407 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 OR4M2Q8NGB6 313 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 OR51A4Q8NGJ6 313 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 OR13C9Q8NGT0 318 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 OR10AC1Q8NH08 325 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 TRMT10AQ8TBZ6 339 aaKnown RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 TMEM186Q96B77 213 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 MSI2Q96DH6 328 aaKnown RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 MED30Q96HR3 178 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 TMEM246Q9BRR3 403 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 SSBP3Q9BWW4 388 aaPredicted RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 TMEM165Q9HC07 324 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 YAE1D1Q9NRH1 226 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 PAK1IP1Q9NWT1 392 aaPredicted RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 TMEM160Q9NX00 188 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 DCAF16Q9NXF7 216 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 KAAG1Q9UBP8 84 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 CLN8Q9UBY8 286 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 CDC42EP3Q9UKI2 254 aa7.66□□□□□ -1.18
NUP54-207ENST00000508583 TEP1Q99973 2627 aaKnown RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 YLPM1P49750 1951 aaKnown RBP7.66□□□□□ -1.18
NUP54-207ENST00000508583 ZANQ9Y493 2812 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 TRBV5-5A0A0J9YX44 114 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 A8MXK9 166 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 ZNF879B4DU55 563 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 F5H0A9 414 aaPredicted RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 TMPRSS2O15393 492 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 AKR7A2O43488 359 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 LMX1BO60663 402 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 ALDOBP05062 364 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 WNT2P09544 360 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 HSMCR30P0CW71 290 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 PGA5P0DJD9 388 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 FSTP19883 344 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 CD80P33681 288 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 SOX2P48431 317 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 PITPNBP48739 271 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 HNRNPA0Q13151 305 aaKnown RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 KCTD21Q4G0X4 260 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 LRRC10Q5BKY1 277 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 SFRP4Q6FHJ7 346 aaPredicted RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 BTNL3Q6UXE8 466 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 SAXO1Q8IYX7 474 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 NKAIN3Q8N8D7 197 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 ZFP41Q8N8Y5 198 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 ZSCAN4Q8NAM6 433 aaPredicted RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 DEFB108BQ8NET1 73 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 NPRL2Q8WTW4 380 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 PHYHIPQ92561 330 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 PGLYRP3Q96LB9 341 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 CEP19Q96LK0 163 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 GSX1Q9H4S2 264 aaPredicted RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 PPP1R3EQ9H7J1 279 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 VCX3AQ9NNX9 186 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 TMEM138Q9NPI0 162 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 PCDHB16Q9NRJ7 776 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 NLKQ9UBE8 527 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 GLS2Q9UI32 602 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 FOXJ3Q9UPW0 622 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 POLR3KQ9Y2Y1 108 aaPredicted RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 LSM2Q9Y333 95 aaKnown RBP7.65□□□□□ -1.18
NUP54-207ENST00000508583 LRRC42Q9Y546 428 aa7.65□□□□□ -1.18
NUP54-207ENST00000508583 DOCK11Q5JSL3 2073 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 PNMA8CA0A1B0GUJ8 204 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 MEGF11A6BM72 1044 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 OR2AT4A6NND4 320 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 TRAPPC2LH3BP13 241 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 WNT9BO14905 357 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 ADAM20O43506 726 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 NDUFB3O43676 98 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 RHBDL1O75783 438 aa7.64□□□□□ -1.19
NUP54-207ENST00000508583 ZNF205O95201 554 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms