RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ASCC1Q8N9N2 400 aaKnown RBP1.75□□□□□ -2.13
LSM6-205ENST00000507449 OR13C9Q8NGT0 318 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 ZFAND1Q8TCF1 268 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 MRPL48Q96GC5 212 aaKnown RBP1.75□□□□□ -2.13
LSM6-205ENST00000507449 SPACA5Q96QH8 159 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 TM6SF2Q9BZW4 377 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 STMN3Q9NZ72 180 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 ENPP4Q9Y6X5 453 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 V9GYY9 64 aa1.75□□□□□ -2.13
LSM6-205ENST00000507449 ELP1O95163 1332 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 A0A0G2JMP0 313 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 A0A0X1KG70 313 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 GSTTP1A0A1W2PQM5 241 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 M0R1B8 84 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 UPK1AO00322 258 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 MFNGO00587 321 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 ERFP50548 548 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 TAS2R60P59551 318 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 ADIGQ0VDE8 80 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 BTN1A1Q13410 526 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 CDNFQ49AH0 187 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 HSP90AA4PQ58FG1 418 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 TTC32Q5I0X7 151 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 FAM104BQ5XKR9 115 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 CASP12Q6UXS9 341 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 FAM58AQ8N1B3 248 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 OR4K2Q8NGD2 314 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 FAM57AQ8TBR7 257 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 ZNF75CPQ92670 426 aaPredicted RBP1.74□□□□□ -2.13
LSM6-205ENST00000507449 DERL3Q96Q80 235 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 UTP23Q9BRU9 249 aaKnown RBP1.74□□□□□ -2.13
LSM6-205ENST00000507449 FRMD8P1Q9BZ68 369 aaPredicted RBP1.74□□□□□ -2.13
LSM6-205ENST00000507449 COA1Q9GZY4 146 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 LHX5Q9H2C1 402 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 ANKHQ9HCJ1 492 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 LZTFL1Q9NQ48 299 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 RAB22AQ9UL26 194 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 CFL2Q9Y281 166 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 ORC6Q9Y5N6 252 aa1.74□□□□□ -2.13
LSM6-205ENST00000507449 SEC14L6B5MCN3 397 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 H7C2Y5 167 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 PRMT5O14744 637 aaPredicted RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 DHRS3O75911 302 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 VAPBO95292 243 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 TGM4P49221 684 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 IL5RAQ01344 420 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 MEF2CQ06413 473 aaPredicted RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 LAMTOR4Q0VGL1 99 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 IL15RAQ13261 267 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 PMVKQ15126 192 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 FAM131AQ6UXB0 335 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 PID1Q7Z2X4 250 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 FAM19A1Q7Z5A9 133 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 DAZ4Q86SG3 579 aaKnown RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 CA13Q8N1Q1 262 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 SYS1Q8N2H4 156 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 RNF10Q8N5U6 811 aaKnown RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 LINC00304Q8N9R0 145 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 SLC26A10Q8NG04 563 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 OR1P1Q8NH06 330 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 NT5CQ8TCD5 201 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 TMED9Q9BVK6 235 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 ANGPTL4Q9BY76 406 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 TBL1XR1Q9BZK7 514 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 C6orf50Q9HD87 102 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 DAZ1Q9NQZ3 744 aaKnown RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 IL37Q9NZH6 218 aa1.73□□□□□ -2.13
LSM6-205ENST00000507449 KLF13Q9Y2Y9 288 aaPredicted RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 BZW2Q9Y6E2 419 aaKnown RBP1.73□□□□□ -2.13
LSM6-205ENST00000507449 SIGLEC1Q9BZZ2 1709 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 AQRO60306 1485 aaKnown RBP eCLIP1.72□□□□□ -2.13
LSM6-205ENST00000507449 IZUMO1RA6ND01 250 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 SC5DO75845 299 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 FSTL3O95633 263 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 IGHV1-46P01743 117 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 RHOCP08134 193 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 SEC11BP0C7V7 166 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 HLA-GP17693 338 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 COL8A2P25067 703 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 TEAD1P28347 426 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 MPIP34949 423 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 STK38Q15208 465 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 TOMM34Q15785 309 aaPredicted RBP1.72□□□□□ -2.13
LSM6-205ENST00000507449 TMEM69Q5SWH9 247 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 CLEC19AQ6UXS0 136 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 ITPRIPQ8IWB1 547 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 LRRC8AQ8IWT6 810 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 GAPTQ8N292 157 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 ZFP62Q8NB50 900 aaPredicted RBP1.72□□□□□ -2.13
LSM6-205ENST00000507449 C1orf64Q8NEQ6 169 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 ORAOV1Q8WV07 137 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 LRRC39Q96DD0 335 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 ADTRPQ96IZ2 230 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 PDCD1LG2Q9BQ51 273 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 SHCBP1LQ9BZQ2 653 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 ASB7Q9H672 318 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 SLC7A11Q9UPY5 501 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 ACOT9Q9Y305 439 aa1.72□□□□□ -2.13
LSM6-205ENST00000507449 SLC5A10A0PJK1 596 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 RNF113AO15541 343 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms