RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 M1APQ8TC57 530 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 STT3BQ8TCJ2 826 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 GPR119Q8TDV5 335 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 GPER1Q99527 375 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 TBL1XR1Q9BZK7 514 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 PNO1Q9NRX1 252 aaKnown RBP15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 PADI1Q9ULC6 663 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 URGCP-MRPS24S4R325 110 aa15.01□□□□□ -0.01
SQSTM1-211ENST00000506690 NSG1A0A0A6YYJ2 146 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 IGKV1-9A0A0C4DH69 117 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 CDC14CA4D256 554 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 NPIPB13A6NJU9 1138 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 DHRS7CA6NNS2 312 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 NPIPB4C9JG80 1138 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF878C9JN71 531 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 H0YL77 283 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 TSPAN2O60636 221 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 IGKV3-11P04433 115 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 RND3P61587 244 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 IL13RA2Q14627 380 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 COL13A1Q5TAT6 717 aaPredicted RBP15□□□□□ -0.01
SQSTM1-211ENST00000506690 GAL3ST4Q96RP7 486 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 DUSP15Q9H1R2 295 aaPredicted RBP15□□□□□ -0.01
SQSTM1-211ENST00000506690 PRO1933Q9H354 126 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 GPR84Q9NQS5 396 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 MED29Q9NX70 200 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 CHD9Q3L8U1 2897 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 METTL12A8MUP2 240 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 CYB5BO43169 146 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 CA11O75493 328 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 KLK2P20151 261 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 GLIPR1P48060 266 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 TMEM187Q14656 261 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 CRIP3Q6Q6R5 217 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 OR10AD1Q8NGE0 317 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 OR8B12Q8NGG6 310 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 GPBAR1Q8TDU6 330 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 ABHD5Q8WTS1 349 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 SSX3Q99909 188 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF319Q9P2F9 582 aa15□□□□□ -0.01
SQSTM1-211ENST00000506690 MKRN2OSH3BPM6 223 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 FABP4P15090 132 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 ALDH3B1P43353 468 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 KIR2DL1P43626 348 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 SP5Q6BEB4 398 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 OR2T2Q6IF00 324 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 C1QL2Q7Z5L3 287 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 COMMD2Q86X83 199 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 OR5R1Q8NH85 324 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF701Q9NV72 531 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 OBP2AQ9NY56 170 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 KIAA1456Q9P272 454 aa14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 ATXN7L1Q9ULK2 861 aaPredicted RBP14.99□□□□□ -0.01
SQSTM1-211ENST00000506690 TRGC1P0CF51 173 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 CCL1P22362 96 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 ANOS1P23352 680 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 CEACAM6P40199 344 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 PIGPP57054 158 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 POU3F1Q03052 451 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF429Q86V71 674 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 LRTM2Q8N967 370 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 MISP3Q96FF7 219 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 TGIF2Q9GZN2 237 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 TCEAL2Q9H3H9 227 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 IGFLR1Q9H665 355 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 MCTS1Q9ULC4 181 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 SLCO1B1Q9Y6L6 691 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF43P17038 809 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 HSF1Q00613 529 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 PPA1Q15181 289 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 SP6Q3SY56 376 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 TMEM176BQ3YBM2 270 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 ARMC6Q6NXE6 501 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 LYZL2Q7Z4W2 148 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 ZNF721Q8TF20 911 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 TVP23CQ96ET8 276 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 FAM71F1Q96KD3 344 aaPredicted RBP14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 TM2D1Q9BX74 207 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 LIME1Q9H400 295 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 RCL1Q9Y2P8 373 aaKnown RBP14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 LHFPL6Q9Y693 200 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 C2orf16Q68DN1 1984 aa14.98□□□□□ -0.01
SQSTM1-211ENST00000506690 KIR2DS5A0A0G2JLQ3 304 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 A0A0G2JNG1 304 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 KIR2DS3K7RE56 304 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 DDAH2O95865 285 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 OR5AC1P0C628 307 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 KIR2DS5Q14953 304 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 H1FNTQ75WM6 255 aaPredicted RBP14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 OR52M1Q8NGK5 317 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 FRZBQ92765 325 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 C18orf12Q96KH6 178 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 LURAP1Q96LR2 239 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 NEU1Q99519 415 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 ABHD14AQ9BUJ0 271 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 SMOC1Q9H4F8 434 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 NAA60Q9H7X0 242 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 LANCL2Q9NS86 450 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 KLHL13Q9P2N7 655 aa14.97□□□□□ -0.01
SQSTM1-211ENST00000506690 HSF4Q9ULV5 492 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms