RNA–Protein interactions for RNA: ENST00000506080.5

PTPN20-216, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-216ENST00000506080 PCDHGB5Q9Y5G0 923 aa7.36□□□□□ -1.23
PTPN20-216ENST00000506080 HILPDAQ9Y5L2 63 aa7.36□□□□□ -1.23
PTPN20-216ENST00000506080 U3KQK5 164 aa7.36□□□□□ -1.23
PTPN20-216ENST00000506080 RYR2Q92736 4967 aa7.36□□□□□ -1.23
PTPN20-216ENST00000506080 ODF3BA8MYP8 253 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ZNF732B4DXR9 585 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 CST4P01036 141 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 APOC1P02654 83 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 SPI1P17947 270 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 IFNGR2P38484 337 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 NUDT2P50583 147 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 GLYATQ6IB77 296 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ACP7Q6ZNF0 438 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ERI1Q8IV48 349 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 BATF2Q8N1L9 274 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 LINC00482Q8N8I6 264 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR8D4Q8NGM9 314 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR13D1Q8NGV5 346 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ZNF671Q8TAW3 534 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 RNF133Q8WVZ7 376 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ZNF488Q96MN9 340 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ABHD6Q9BV23 337 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 DCAF13Q9NV06 445 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 CD300AQ9UGN4 299 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 SAMD4AQ9UPU9 718 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 LRP12Q9Y561 859 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 CDH10Q9Y6N8 788 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 EPPK1P58107 5090 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 DYNC2H1Q8NCM8 4307 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 SLC1A7O00341 560 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 MTRF1O75570 445 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 LPLP06858 475 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 H2BFMP0C1H6 154 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 RRM2P31350 389 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 PRDX2P32119 198 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR12D2P58182 307 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 GNG3P63215 75 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 SLC34A1Q06495 639 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 ZNF626Q68DY1 528 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 CGB2Q6NT52 195 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 C8orf82Q6P1X6 216 aaPredicted RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 HAGHLQ6PII5 290 aaPredicted RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR9Q2Q8NGE9 314 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR4X2Q8NGF9 303 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 RP9Q8TA86 221 aaKnown RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 FAM81AQ8TBF8 368 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 AQP3Q92482 292 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 INTS14Q96SY0 518 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 HOPXQ9BPY8 73 aaPredicted RBP7.35□□□□□ -1.23
PTPN20-216ENST00000506080 GPR61Q9BZJ8 451 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 NMNAT2Q9BZQ4 307 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR51I2Q9H344 312 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 RGCCQ9H4X1 137 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 TBC1D23Q9NUY8 699 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 OR14J1Q9UGF5 321 aa7.35□□□□□ -1.23
PTPN20-216ENST00000506080 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 SH2D7A6NKC9 451 aaPredicted RBP7.34□□□□□ -1.23
PTPN20-216ENST00000506080 C17orf98A8MV24 154 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 C3orf84H3BNL1 204 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 SLC22A2O15244 555 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 SEMG1P04279 462 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 NHLRC4P0CG21 123 aaPredicted RBP7.34□□□□□ -1.23
PTPN20-216ENST00000506080 COX4I1P13073 169 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 CD24P25063 80 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 OPRL1P41146 370 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 DLX6P56179 175 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 SMIM21Q3B7S5 101 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 LINC01590Q5TEZ4 76 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 RPL13AP3Q6NVV1 102 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 ETV3LQ6ZN32 361 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 MOB3CQ70IA8 216 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 CALHM1Q8IU99 346 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 WFDC3Q8IUB2 231 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 HIST2H2ABQ8IUE6 130 aaPredicted RBP7.34□□□□□ -1.23
PTPN20-216ENST00000506080 MRPL41Q8IXM3 137 aaKnown RBP7.34□□□□□ -1.23
PTPN20-216ENST00000506080 ZNF561Q8N587 486 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 OR8B12Q8NGG6 310 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 NDNFQ8TB73 568 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 FANCD2OSQ96PS1 177 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 ZNF649Q9BS31 505 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 TSSK6Q9BXA6 273 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 MED20Q9H944 212 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 FGFR1OP2Q9NVK5 253 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 RASL12Q9NYN1 266 aa7.34□□□□□ -1.23
PTPN20-216ENST00000506080 KRTAP4-8A0A0G2JLE6 195 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 HMGB1P1B2RPK0 211 aaPredicted RBP7.33□□□□□ -1.24
PTPN20-216ENST00000506080 TK1P04183 234 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 IGHV1-8P0DP01 117 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 AZGP1P25311 298 aaKnown RBP7.33□□□□□ -1.24
PTPN20-216ENST00000506080 LMO1P25800 156 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 GSTT1P30711 240 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 DYNLT3P51808 116 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 ID3Q02535 119 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 DCTN2Q13561 401 aaKnown RBP7.33□□□□□ -1.24
PTPN20-216ENST00000506080 CEACAM21Q3KPI0 293 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 ABCA11PQ4W5N1 156 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 PLCXD3Q63HM9 321 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 ZNF770Q6IQ21 691 aaPredicted RBP7.33□□□□□ -1.24
PTPN20-216ENST00000506080 LCN8Q6JVE9 175 aa7.33□□□□□ -1.24
PTPN20-216ENST00000506080 RNF148Q8N7C7 305 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms