RNA–Protein interactions for RNA: ENST00000506060.5

POLR2J3-211, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3

Gene POLR2J3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-211ENST00000506060 OSR2Q8N2R0 312 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 NUP37Q8NFH4 326 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 OR52I2Q8NH67 350 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 TRIM63Q969Q1 353 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 GAL3ST1Q99999 423 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 TM2D1Q9BX74 207 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 LPAR5Q9H1C0 372 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 CXXC4Q9H2H0 198 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 BANF2Q9H503 90 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 ESRP2Q9H6T0 727 aaKnown RBP10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 RBFOX1Q9NWB1 397 aaKnown RBP10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 NPAP1Q9NZP6 1156 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 TBC1D24Q9ULP9 559 aa10.3□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM240BA0A1B0GVZ2 78 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 PLSCR5A0PG75 271 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A10PA6NDY2 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A18PA6NE21 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A16PA6NEW6 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A20PA6NIJ5 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A8PA6NJQ4 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A7PA6NKC0 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A22PA8MWA6 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A12PA8MX19 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A5PA8MXJ8 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A23PA8MXZ1 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 H7C417 338 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 J3QT63 122 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 RAB27BO00194 218 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 SPRY1O43609 319 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 ORC5O43913 435 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 PLATP00750 562 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 CD3GP09693 182 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A15PP0C7V4 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A13PP0C7W8 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A14PP0C7W9 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM90A24PP0C7X0 464 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 ZNF250P15622 560 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 MPV17P39210 176 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 CBX5P45973 191 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 NKX6-1P78426 367 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 MRPS15P82914 257 aaKnown RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 IL24Q13007 206 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 ST3GAL2Q16842 350 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 C4orf17Q53FE4 359 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 RNASE12Q5GAN4 147 aaKnown RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 Q6ZTK2 550 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 FAM89BQ8N5H3 189 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 TMEM104Q8NE00 496 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 HPSE2Q8WWQ2 592 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 ZC3HAV1LQ96H79 300 aaKnown RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 NEDD4LQ96PU5 975 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 COPZ2Q9P299 210 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 MTFP1Q9UDX5 166 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 ZNF107Q9UII5 783 aaPredicted RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 RBMX2Q9Y388 322 aaKnown RBP10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 CACNG2Q9Y698 323 aa10.29□□□□□ -0.76
POLR2J3-211ENST00000506060 PRR14LQ5THK1 2151 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 SERPINE3A8MV23 424 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 ATP6V1G2-DDX39BF2Z307 99 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 ANGPTL7O43827 346 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 CA11O75493 328 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 IGHV3-13P01766 116 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 MELTFP08582 738 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 HIST1H1DP16402 221 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 AGAP20933 346 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 BLVRBP30043 206 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 RCVRNP35243 200 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 GNG2P59768 71 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 ADORA2A-AS1P86434 159 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 ZNF260Q3ZCT1 412 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 ELP2Q6IA86 826 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 CRIP3Q6Q6R5 217 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 SLC22A25Q6T423 547 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 FIP1L1Q6UN15 594 aaKnown RBP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 DNM1P46Q6ZS02 220 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 RNF144BQ7Z419 303 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 LINC00596Q86U02 117 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 PIAS4Q8N2W9 510 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 ZNF808Q8N4W9 903 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 OR10K1Q8NGX5 313 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 PRR7Q8TB68 274 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 GPX8Q8TED1 209 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 AQP3Q92482 292 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 Q96M66 194 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 C11orf54Q9H0W9 315 aaPredicted RBP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 IFT46Q9NQC8 304 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 POU2F3Q9UKI9 436 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 NBASA2RRP1 2371 aa10.28□□□□□ -0.76
POLR2J3-211ENST00000506060 DIDO1Q9BTC0 2240 aaKnown RBP10.27□□□□□ -0.76
POLR2J3-211ENST00000506060 ANKRD20A5PA0PJZ0 165 aa10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 PLA2G10O15496 165 aa10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 MPZP25189 248 aa10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 RBM11P57052 281 aaKnown RBP10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 ARFRP1Q13795 201 aa10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 FAM76BQ5HYJ3 339 aa10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 NHLRC3Q5JS37 347 aa10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 HAGHLQ6PII5 290 aaPredicted RBP10.27□□□□□ -0.77
POLR2J3-211ENST00000506060 PLET1Q6UQ28 207 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms