RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 RFPL4AL1F8VTS6 287 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 J3QT63 122 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 RHBDL1O75783 438 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 NRASP01111 189 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 RBP4P02753 201 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 ATP6V1B2P21281 511 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 COX7A1P24310 79 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 PRDX2P32119 198 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 ARHGDIBP52566 201 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 RIDAP52758 137 aaKnown RBP17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 OR12D2P58182 307 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 CBX1P83916 185 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 TRIM25Q14258 630 aaKnown RBP17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 CNN3Q15417 329 aaKnown RBP17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 NSUN5P1Q3KNT7 163 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 IQCF1Q8N6M8 205 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 PPP1R35Q8TAP8 253 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 MALSU1Q96EH3 234 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 C19orf12Q9NSK7 152 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 ZNF222Q9UK12 451 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 PIGLQ9Y2B2 252 aa17.09■□□□□ 0.33
SQSTM1-210ENST00000506042 DHRS3O75911 302 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 HAAOP46952 286 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 ESRRGP62508 458 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 GINS1Q14691 196 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 KRT74Q7RTS7 529 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 AKR1E2Q96JD6 320 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 LYZL4Q96KX0 146 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 NIPSNAP1Q9BPW8 284 aa17.08■□□□□ 0.32
SQSTM1-210ENST00000506042 ARG1P05089 322 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 ANXA8P13928 327 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 ALOX5APP20292 161 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 BMXP51813 675 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 CLVS2Q5SYC1 327 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 TMEM200BQ69YZ2 307 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 ZBTB49Q6ZSB9 765 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 GDPD3Q7L5L3 318 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 PIGWQ7Z7B1 504 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 CPOQ8IVL8 374 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 ZNF679Q8IYX0 411 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 DNAJC9Q8WXX5 260 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 AJUBAQ96IF1 538 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 PBOV1Q9GZY1 135 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 ARL8BQ9NVJ2 186 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 ZNF446Q9NWS9 450 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 IKZF2Q9UKS7 526 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 GTF2A1LQ9UNN4 478 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 TCF19Q9Y242 345 aa17.07■□□□□ 0.32
SQSTM1-210ENST00000506042 B2RBV5 119 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 F2RL2O00254 374 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 DLGAP1O14490 977 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 DNAJC8O75937 253 aaPredicted RBP17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 CLIC3O95833 236 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 OSMP13725 252 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 CD33P20138 364 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 AZGP1P25311 298 aaKnown RBP17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 HCP5Q6MZN7 132 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 MNTQ99583 582 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 PLEKHA1Q9HB21 404 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 GPR84Q9NQS5 396 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 OR14J1Q9UGF5 321 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 NUFIP1Q9UHK0 495 aaKnown RBP17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 SLC7A11Q9UPY5 501 aa17.06■□□□□ 0.32
SQSTM1-210ENST00000506042 PLXNB1O43157 2135 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 TCRBV5S2A0A599 114 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 MEGF11A6BM72 1044 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 NOS1APO75052 506 aaPredicted RBP17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 TK1P04183 234 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 PGA5P0DJD9 388 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 DYNC1I2Q13409 638 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 IL18R1Q13478 541 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 CRIP3Q6Q6R5 217 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 Q6ZPA2 131 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 TRPM8Q7Z2W7 1104 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 ASCC1Q8N9N2 400 aaKnown RBP17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 OR51E1Q8TCB6 317 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 ASB9Q96DX5 294 aa17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 H2AFY2Q9P0M6 372 aaPredicted RBP17.05■□□□□ 0.32
SQSTM1-210ENST00000506042 DHRS7CA6NNS2 312 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 LOC110117498-PIK3R3F6TDL0 507 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 ATP8B1O43520 1251 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 TFF1P04155 84 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 CHRM2P08172 466 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 PF4V1P10720 104 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 VDAC2P45880 294 aaPredicted RBP17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 APOFQ13790 326 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 BCL2L15Q5TBC7 163 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 SLX4IPQ5VYV7 408 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 Q8N2B8 174 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 OR4M1Q8NGD0 313 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 C17orf50Q8WW18 174 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 FAM206AQ9NX38 181 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 GLS2Q9UI32 602 aa17.04■□□□□ 0.32
SQSTM1-210ENST00000506042 CHST1O43916 411 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 ZNF728P0DKX0 622 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 DYNLT3P51808 116 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 EDDM3BP56851 147 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 ROM1Q03395 351 aa17.03■□□□□ 0.32
SQSTM1-210ENST00000506042 SNAPC1Q16533 368 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.3 ms