RNA–Protein interactions for RNA: ENST00000504443.6

COL6A4P2-202, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

BASIC

Gene COL6A4P2, Length 2,753 nt, Biotype transcribed unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-202ENST00000504443 LFNGQ8NES3 379 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 LRRC3BQ96PB8 259 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 LMF2Q9BU23 707 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 C14orf166Q9Y224 244 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 COA3Q9Y2R0 106 aaPredicted RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 NSG2Q9Y328 171 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 CHD3Q12873 2000 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 NOTCH4Q99466 2003 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 IGKV1D-8A0A087WSZ0 117 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 HIST1H1DP16402 221 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 ATP6V0CP27449 155 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 WNT5AP41221 380 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 OR3A4PP47883 348 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 NOVA1P51513 510 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 RPL23AP62750 156 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 TLE1Q04724 770 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 ATG4DQ86TL0 474 aaPredicted RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 FAM160A2Q8N612 972 aaPredicted RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 TMEM37Q8WXS4 190 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 ELOVL1Q9BW60 279 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 RAB11FIP5Q9BXF6 653 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 TUBD1Q9UJT1 453 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 CEACAM18A8MTB9 384 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 GPR137BO60478 399 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 BGLAPP02818 100 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 FGF5P12034 268 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 CD33P20138 364 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 ZNF93P35789 620 aaPredicted RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 COTL1Q14019 142 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 ZNF141Q15928 474 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 HNRNPA1L2Q32P51 320 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 DCXRQ7Z4W1 244 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 SLC22A24Q8N4F4 322 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 OR5D18Q8NGL1 313 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 NT5CQ8TCD5 201 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 RCC1LQ96I51 464 aaKnown RBP12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 SCGB3A2Q96PL1 93 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 MYOTQ9UBF9 498 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 R4GMQ9 66 aa12.47□□□□□ -0.41
COL6A4P2-202ENST00000504443 CRTAPO75718 401 aaPredicted RBP12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 TK1P04183 234 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 CHRM2P08172 466 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 DBHP09172 617 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 POLR2HP52434 150 aaKnown RBP12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 RUNX1Q01196 453 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 ETFRF1Q6IPR1 90 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 TM4SF19Q96DZ7 209 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 ASCL3Q9NQ33 180 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 GPR173Q9NS66 373 aa12.46□□□□□ -0.41
COL6A4P2-202ENST00000504443 FAM24AA6NFZ4 105 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 CLDN34H7C241 214 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 BPNT1O95861 308 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 PVRP15151 417 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 ACKR1Q16570 336 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 C1orf189Q5VU69 101 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 ABLIM2Q6H8Q1 611 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF66Q6ZN08 573 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 NKAIN3Q8N8D7 197 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 OR52N5Q8NH56 324 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 EMG1Q92979 244 aaKnown RBP12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF2Q9BSG1 426 aaPredicted RBP12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 CERS4Q9HA82 394 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF701Q9NV72 531 aaPredicted RBP12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 TBX21Q9UL17 535 aa12.46□□□□□ -0.42
COL6A4P2-202ENST00000504443 NSG1A0A0A6YYJ2 146 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 A0A1B0GW64 132 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 TMEM14DPA8MWL7 114 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF878C9JN71 531 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 SRSF10O75494 262 aaKnown RBP12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 GCGP01275 180 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 SLC37A1P57057 533 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 H3F3AP84243 136 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ROM1Q03395 351 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ELAVL3Q14576 367 aaKnown RBP12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF77Q15935 545 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 THEM4Q5T1C6 240 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 SULF2Q8IWU5 870 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 TOMM40LQ969M1 308 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 VSTM2LQ96N03 204 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 SLC7A11Q9UPY5 501 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 POLR3KQ9Y2Y1 108 aaPredicted RBP12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 B3GALT1Q9Y5Z6 326 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 GON4LQ3T8J9 2241 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 RTTNQ86VV8 2226 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 PRSS37A4D1T9 235 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 HSPB2A8KAH6 182 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 CST2P09228 141 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 FOXF1Q12946 379 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 OR5I1Q13606 314 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 HSPB2Q16082 182 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 CHRFAM7AQ494W8 412 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 SUMF1Q8NBK3 374 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF248Q8NDW4 579 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 OR10A7Q8NGE5 316 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 ZNF558Q96NG5 402 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 CHST11Q9NPF2 352 aa12.45□□□□□ -0.42
COL6A4P2-202ENST00000504443 MRPS28Q9Y2Q9 187 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 251.2 ms