RNA–Protein interactions for RNA: ENST00000504430.5

NIPBL-204, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 3,455 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-204ENST00000504430 A0A1W2PRE2 83 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 K7EP13 123 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 FGF1P05230 155 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 HTR1EP28566 365 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RPL35P42766 123 aaKnown RBP4.21□□□□□ -1.74
NIPBL-204ENST00000504430 PSMD8P48556 350 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 SRP9P49458 86 aaKnown RBP4.21□□□□□ -1.74
NIPBL-204ENST00000504430 OR12D2P58182 307 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RAB2AP61019 212 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 GNG5P63218 68 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 BAMBIQ13145 260 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 SLC25A35Q3KQZ1 300 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF324BQ6AW86 544 aaPredicted RBP4.21□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF627Q7L945 461 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RBM23Q86U06 439 aaKnown RBP4.21□□□□□ -1.74
NIPBL-204ENST00000504430 TGIF2LYQ8IUE0 185 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 SECTM1Q8WVN6 248 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 TMBIM1Q969X1 311 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RNF126Q9BV68 326 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RBM38Q9H0Z9 239 aaKnown RBP4.21□□□□□ -1.74
NIPBL-204ENST00000504430 PRORYQ9H606 182 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 JPT1Q9UK76 154 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 SIGLEC9Q9Y336 463 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 RFNGQ9Y644 331 aa4.21□□□□□ -1.74
NIPBL-204ENST00000504430 CLUHO75153 1309 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 LOC102724200A0A096LPH7 203 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF726A6NNF4 738 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 GABRA4P48169 554 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ATP4BP51164 291 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 NDUFA8P51970 172 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 EDDM3AQ14507 147 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 DEFB115Q30KQ5 88 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF684Q5T5D7 378 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 FAM78BQ5VT40 261 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 TRNP1Q6NT89 227 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SPNS3Q6ZMD2 512 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SKA3Q8IX90 412 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF740Q8NDX6 193 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 REEP6Q96HR9 211 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 GINS3Q9BRX5 216 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 COA1Q9GZY4 146 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SPANXB1Q9NS25 103 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 RASL12Q9NYN1 266 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ASF1AQ9Y294 204 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 NUP153P49790 1475 aaKnown RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SAA2-SAA4A0A096LPE2 208 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SPAG7O75391 227 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 RDH16O75452 317 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 TRMUO75648 421 aaKnown RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 CT45A6P0DMU7 189 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 CT45A5P0DMU8 189 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 CT45A7P0DMV0 189 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 RAB25P57735 213 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 RUNX3Q13761 415 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 TSNQ15631 228 aaKnown RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 CT45A1Q5HYN5 189 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 KCTD16Q68DU8 428 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 RWDD4Q6NW29 188 aaKnown RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 PAMR1Q6UXH9 720 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 TMPPEQ6ZT21 453 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 OR10R2Q8NGX6 335 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 CT45A3Q8NHU0 189 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 LRRC29Q8WV35 223 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 RGP1Q92546 391 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SMARCD1Q96GM5 515 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 PAGE5Q96GU1 130 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SIX2Q9NPC8 291 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ANXA10Q9UJ72 324 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ELF5Q9UKW6 265 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 ZNF257Q9Y2Q1 563 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 GAGE12JA6NER3 117 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 DRD3P35462 400 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 PRDX1Q06830 199 aaKnown RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 DAZAP2Q15038 168 aaPredicted RBP4.2□□□□□ -1.74
NIPBL-204ENST00000504430 WDR38Q5JTN6 314 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SLC18B1Q6NT16 456 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 SMARCD3Q6STE5 483 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 TMEM178AQ8NBL3 297 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 DEPPQ9NTK1 212 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 EHFQ9NZC4 300 aa4.2□□□□□ -1.74
NIPBL-204ENST00000504430 DHX57Q6P158 1386 aaKnown RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 SYNMO15061 1565 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 PPP5D1E7EU14 171 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 F5H5K5 113 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 H3BP45 60 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 CYB5BO43169 146 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 PFN1P07737 140 aaKnown RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 BPGMP07738 259 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 IL1RNP18510 177 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 PROZP22891 400 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 RAP1BP61224 184 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 MAXP61244 160 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 PARP15Q460N3 678 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 CIARTQ8N365 385 aaPredicted RBP4.19□□□□□ -1.74
NIPBL-204ENST00000504430 OR10AD1Q8NGE0 317 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 TCTEX1D2Q8WW35 142 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 OR51E2Q9H255 320 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 IL25Q9H293 177 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 ANGPT4Q9Y264 503 aa4.19□□□□□ -1.74
NIPBL-204ENST00000504430 HSPB11Q9Y547 144 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms