RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 APOL4Q9BPW4 351 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 NMUR2Q9GZQ4 415 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 ZNF696Q9H7X3 374 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 RDH14Q9HBH5 336 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 THYN1Q9P016 225 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 CNOT1A5YKK6 2376 aaKnown RBP3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 MYO15AQ9UKN7 3530 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 BPTFQ12830 3046 aa3.41□□□□□ -1.86
PDLIM1P4-201ENST00000504327 DMDP11532 3685 aa3.4□□□□□ -1.86
PDLIM1P4-201ENST00000504327 FAM208BQ5VWN6 2430 aa3.4□□□□□ -1.86
PDLIM1P4-201ENST00000504327 TRBV5-4A0A0C4DH59 114 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KIR2DS1A0A191URI9 304 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 A0A1B0GWB2 263 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 A0A1W2PR80 420 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRABD2BA6NFA1 517 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MSGN1A6NI15 193 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ARGFXA6NJG6 315 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF487B1APH4 448 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NPIPB9F8W1W9 429 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF593O00488 134 aaPredicted RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RAD51CO43502 376 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SSNA1O43805 119 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 EIF3GO75821 320 aaKnown RBP eCLIP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 AQP8O94778 261 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PROSCO94903 275 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MPZL1O95297 269 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ATP6V1G2O95670 118 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NGFP01138 241 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CGAP01215 116 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IGLV3-27P01718 113 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ARG1P05089 322 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CDK1P06493 297 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR8U9P0C7N5 309 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LIPCP11150 499 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CELP19835 753 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CFL1P23528 166 aaKnown RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 IGFBP5P24593 272 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LAMA1P25391 3075 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SDC4P31431 198 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ALDH3B2P48448 385 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 STC1P52823 247 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LIM2P55344 173 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RWDD2BP57060 319 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MLLT11Q13015 90 aaPredicted RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KIAA0141Q14154 515 aaPredicted RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KCNJ11Q14654 390 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KIR2DS1Q14954 304 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ARL6IP1Q15041 203 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ACSM3Q53FZ2 586 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MUC21Q5SSG8 566 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 UBE2UQ5VVX9 321 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FAM219BQ5XKK7 198 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 Q6ZT83 130 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MBOAT2Q6ZWT7 520 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NT5DC3Q86UY8 548 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRAPPC5Q8IUR0 188 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LACC1Q8IV20 430 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GID4Q8IVV7 300 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NRMQ8IXM6 262 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PIANPQ8IYJ0 282 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PUSL1Q8N0Z8 303 aaKnown RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DEFB106AQ8N104 65 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FTMTQ8N4E7 242 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CCDC54Q8NEL0 328 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PRSS33Q8NF86 280 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 BEST4Q8NFU0 473 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR8U1Q8NH10 309 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF564Q8TBZ8 553 aaPredicted RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 OR5P2Q8WZ92 322 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 AP3S1Q92572 193 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FGF11Q92914 225 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CLDN23Q96B33 292 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF354BQ96LW1 612 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C9orf85Q96MD7 179 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ACTR6Q9GZN1 396 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MFSD1Q9H3U5 465 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LIME1Q9H400 295 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CAB39LQ9H9S4 337 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ACOT13Q9NPJ3 140 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TIGARQ9NQ88 270 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SPHK2Q9NRA0 654 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SLC2A9Q9NRM0 540 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ABCC13Q9NSE7 274 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DEPPQ9NTK1 212 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 Q9UF83 564 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RIMS3Q9UJD0 308 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PYCARDQ9ULZ3 195 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MMP17Q9ULZ9 603 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MGAT4AQ9UM21 535 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FBXO7Q9Y3I1 522 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SPAG17Q6Q759 2223 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DMXL1Q9Y485 3027 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MYO18BQ8IUG5 2567 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KIAA1549LQ6ZVL6 1849 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TEP1Q99973 2627 aaKnown RBP3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CEP295Q9C0D2 2601 aa3.4□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FANCMQ8IYD8 2048 aa3.39□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LOC105371267A0A1B0GV96 52 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms