RNA–Protein interactions for RNA: ENST00000504016.1

SUB1-204, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-204ENST00000504016 SRMP19623 302 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 CCNOP22674 350 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 CD82P27701 267 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 MPIP34949 423 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 HADHBP55084 474 aaKnown RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 MAP3K7CLP57077 242 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 KLF3P57682 345 aaPredicted RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 OR2B8PP59922 312 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ANGPT1Q15389 498 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 RPEL1Q2QD12 228 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ERICH5Q6P6B1 374 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 WDR59Q6PJI9 974 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ST13P4Q8IZP2 240 aaPredicted RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 LRRC75AQ8NAA5 344 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 DRAXINQ8NBI3 349 aaPredicted RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 ITFG1Q8TB96 612 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 PIH1D2Q8WWB5 315 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 FAM131CQ96AQ9 280 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 RCN3Q96D15 328 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 IGF2BP2-AS1Q96M15 143 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 GLT1D1Q96MS3 346 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 CSPG4P5Q96PW8 444 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 NAPGQ99747 312 aaPredicted RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 TM6SF2Q9BZW4 377 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 TRIM45Q9H8W5 580 aaPredicted RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 SND1-IT1Q9HBX3 110 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ADA2Q9NZK5 511 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ZMAT5Q9UDW3 170 aaKnown RBP1.71□□□□□ -2.14
SUB1-204ENST00000504016 HMGXB4Q9UGU5 601 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 SLC22A7Q9Y694 548 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 ENPP4Q9Y6X5 453 aa1.71□□□□□ -2.14
SUB1-204ENST00000504016 MYL12BO14950 172 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 NACADO15069 1562 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 RNF113AO15541 343 aaKnown RBP1.7□□□□□ -2.14
SUB1-204ENST00000504016 FARS2O95363 451 aaKnown RBP1.7□□□□□ -2.14
SUB1-204ENST00000504016 FSTL3O95633 263 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 NPPAP01160 153 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 IGHV1-46P01743 117 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 CXCR1P25024 350 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 ATP6V0D1P61421 351 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 YWHAEP62258 255 aaKnown RBP1.7□□□□□ -2.14
SUB1-204ENST00000504016 GRB2P62993 217 aaKnown RBP1.7□□□□□ -2.14
SUB1-204ENST00000504016 PAFAH1B2P68402 229 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 OTOGLQ3ZCN5 2332 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 NLRC5Q86WI3 1866 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 ITPRIPQ8IWB1 547 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 LRRC8AQ8IWT6 810 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 TCAIMQ8N3R3 496 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 TRAM1L1Q8N609 369 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 C8orf31Q8N9H6 132 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 OR4C13Q8NGP0 309 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 NAT6Q93015 286 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 SNF8Q96H20 258 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 ZBED3Q96IU2 234 aaPredicted RBP1.7□□□□□ -2.14
SUB1-204ENST00000504016 UBE2E2Q96LR5 201 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 OR2V2Q96R30 315 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 AGMATQ9BSE5 352 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 TBL1XR1Q9BZK7 514 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 C8orf33Q9H7E9 229 aaPredicted RBP1.7□□□□□ -2.14
SUB1-204ENST00000504016 VCX3AQ9NNX9 186 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 AGPAT3Q9NRZ7 376 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 CES1P1Q9UKY3 287 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 GMEB1Q9Y692 573 aa1.7□□□□□ -2.14
SUB1-204ENST00000504016 AQRO60306 1485 aaKnown RBP eCLIP1.69□□□□□ -2.14
SUB1-204ENST00000504016 TRIP11Q15643 1979 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 LINC00854A0A1B0GVQ3 168 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 A0A1W2PRF3 423 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 A0A1W2PRM7 423 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 GOLGA8JA6NMD2 632 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 LINC01619G3V211 115 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 ZBTB5O15062 677 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 GOLGA8HP0CJ92 632 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 GFAPP14136 432 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 PMCHP20382 165 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 ARR3P36575 388 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 TGFBR2P37173 567 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 RGS6P49758 472 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 TNFRSF9Q07011 255 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 TSC22D1Q15714 1073 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 ZNF141Q15928 474 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 LDLRAD2Q5SZI1 272 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 STEAP4Q687X5 459 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 APOBEC3HQ6NTF7 200 aaKnown RBP1.69□□□□□ -2.14
SUB1-204ENST00000504016 MORN3Q6PF18 240 aaPredicted RBP1.69□□□□□ -2.14
SUB1-204ENST00000504016 SMARCD3Q6STE5 483 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 LINC00336Q6ZUF6 198 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 FAM122BQ7Z309 247 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 COMTD1Q86VU5 262 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 IQCF2Q8IXL9 164 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 CMTM8Q8IZV2 173 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 ZCCHC24Q8N2G6 241 aaKnown RBP1.69□□□□□ -2.14
SUB1-204ENST00000504016 ARHGAP18Q8N392 663 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 ASCC1Q8N9N2 400 aaKnown RBP1.69□□□□□ -2.14
SUB1-204ENST00000504016 WDR31Q8NA23 367 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 OR1S1Q8NH92 325 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 ITLN2Q8WWU7 325 aaPredicted RBP1.69□□□□□ -2.14
SUB1-204ENST00000504016 ING5Q8WYH8 240 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 KIAA1143Q96AT1 154 aaPredicted RBP1.69□□□□□ -2.14
SUB1-204ENST00000504016 FAM19A4Q96LR4 140 aa1.69□□□□□ -2.14
SUB1-204ENST00000504016 GABRG3Q99928 467 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms