RNA–Protein interactions for RNA: ENST00000502773.5

PDGFC-203, Transcript of platelet derived growth factor C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFC, Length 4,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-203ENST00000502773 OR8G1Q15617 311 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF546Q86UE3 836 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 SLC38A9Q8NBW4 561 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 OR5T1Q8NG75 326 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 OR8B12Q8NGG6 310 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 SLC25A28Q96A46 364 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 CXorf58Q96LI9 332 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 FOXB1Q99853 325 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 POFUT1Q9H488 388 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 TMEM231Q9H6L2 316 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF286AQ9HBT8 521 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 RAB18Q9NP72 206 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 B3GAT1Q9P2W7 334 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 PIGLQ9Y2B2 252 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 LY6G6EA0A0G2JKS1 128 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF816-ZNF321PA0A0X1KG74 233 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 ZNF729A6NN14 1252 aaPredicted RBP6.53□□□□□ -1.36
PDGFC-203ENST00000502773 AQP7O14520 342 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 HERV-K104P61576 105 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 VAMP2P63027 116 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 DMWDQ09019 674 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 GALNTL5Q7Z4T8 443 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 LINC00596Q86U02 117 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 IL22RA1Q8N6P7 574 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 OR11H7Q8NGC8 314 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 CT55Q8WUE5 264 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 PIGTQ969N2 578 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 AMELYQ99218 206 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 EIF5A2Q9GZV4 153 aaKnown RBP6.53□□□□□ -1.36
PDGFC-203ENST00000502773 HRH4Q9H3N8 390 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 NECAP2Q9NVZ3 263 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 HSF4Q9ULV5 492 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 LHFPL6Q9Y693 200 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 U3KQA8 63 aa6.53□□□□□ -1.36
PDGFC-203ENST00000502773 COL5A1P20908 1838 aaPredicted RBP6.52□□□□□ -1.36
PDGFC-203ENST00000502773 A0A1B0GV50 99 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF724A8MTY0 619 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 CDC14BO60729 498 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 MYF5P13349 255 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 BLVRBP30043 206 aaPredicted RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 RFC3P40938 356 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 P2RY4P51582 365 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 KISS1Q15726 138 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 DMRTA1Q5VZB9 504 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 ACOT7LQ6ZUV0 252 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 GFI1Q99684 422 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 RTN4RQ9BZR6 473 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 TMEM38BQ9NVV0 291 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 PURGQ9UJV8 347 aaKnown RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 ING1Q9UK53 422 aaPredicted RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 LHX6Q9UPM6 363 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 V9GYS6 101 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 PCNTO95613 3336 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 C20orf202A1L168 122 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 TIAF1O95411 115 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 SCGB1D1O95968 90 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 APLNRP35414 380 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 DLSTP36957 453 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 RPS27P42677 84 aaKnown RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 HIST1H3AP68431 136 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 HIST2H3PS2Q5TEC6 136 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 HIST2H3AQ71DI3 136 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 TMUB2Q71RG4 321 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 Q7L0L9 218 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 SAXO1Q8IYX7 474 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 HPSE2Q8WWQ2 592 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 FOXN4Q96NZ1 517 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 C20orf24Q9BUV8 137 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 ELOVL1Q9BW60 279 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 HIPK2Q9H2X6 1198 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 ZNF629Q9UEG4 869 aaPredicted RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 KLF7O75840 302 aaPredicted RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 CCL3P10147 92 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 TDGF1P13385 188 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 SLC22A6Q4U2R8 563 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 DBX2Q6ZNG2 339 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 MRPL21Q7Z2W9 205 aaKnown RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 P4HA3Q7Z4N8 544 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 MRPL41Q8IXM3 137 aaKnown RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 OR10AC1Q8NH08 325 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 APOBEC3DQ96AK3 386 aaPredicted RBP6.52□□□□□ -1.37
PDGFC-203ENST00000502773 APH1AQ96BI3 265 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 ACKR4Q9NPB9 350 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 DNAJB11Q9UBS4 358 aa6.52□□□□□ -1.37
PDGFC-203ENST00000502773 A0A0B4J293 547 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 TEX13DA0A0J9YY54 714 aaPredicted RBP6.51□□□□□ -1.37
PDGFC-203ENST00000502773 ANKRD30BLA7E2S9 258 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 DVL2O14641 736 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 TNFSF11O14788 317 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 MPZL1O95297 269 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 NRASP01111 189 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 UMODP07911 640 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 VSIG8P0DPA2 414 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 TPT1P13693 172 aaKnown RBP6.51□□□□□ -1.37
PDGFC-203ENST00000502773 AVPR2P30518 371 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 SLC10A1Q14973 349 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 SLC36A1Q7Z2H8 476 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 SULF2Q8IWU5 870 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 OR52N4Q8NGI2 321 aa6.51□□□□□ -1.37
PDGFC-203ENST00000502773 OR51A4Q8NGJ6 313 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms