RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 METTL8Q9H825 291 aaKnown RBP8.59□□□□□ -1.03
CLIP1-204ENST00000501271 FGF16O43320 207 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 DNPH1O43598 174 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CXCL13O43927 109 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CER1O95813 267 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 HOXB5P09067 269 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CST2P09228 141 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 DUSP3P51452 185 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CARD18P57730 90 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 IL15RAQ13261 267 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 SURF2Q15527 256 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-204ENST00000501271 TAF9Q16594 264 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 NSUN5P2Q63ZY6 315 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 BAP18Q8IXM2 172 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CCDC54Q8NEL0 328 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 TMED6Q8WW62 240 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 SPSB1Q96BD6 273 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 LRRC46Q96FV0 321 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 NARS2Q96I59 477 aaKnown RBP8.58□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF2Q9BSG1 426 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-204ENST00000501271 PIGMQ9H3S5 423 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 DEPPQ9NTK1 212 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 OR6C6A6NF89 314 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 LCATP04180 440 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 RGS19P49795 217 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 AKR1C2P52895 323 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CLDN15P56746 228 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 AKR1C1Q04828 323 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 ARL6IP1Q15041 203 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 WIPI1Q5MNZ9 446 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-204ENST00000501271 ABLIM2Q6H8Q1 611 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 PLXDC2Q6UX71 529 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 AAED1Q7RTV5 226 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 TMEM200AQ86VY9 491 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 NAXEQ8NCW5 288 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 FGFBP3Q8TAT2 258 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 DYRK2Q92630 601 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 MARC2Q969Z3 335 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 ADGRG7Q96K78 797 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 C2orf50Q96LR7 162 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 AQP10Q96PS8 301 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 FAAP24Q9BTP7 215 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 METTL9Q9H1A3 318 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 LIME1Q9H400 295 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 SMOC1Q9H4F8 434 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 ACKR4Q9NPB9 350 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 AK3Q9UIJ7 227 aa8.58□□□□□ -1.04
CLIP1-204ENST00000501271 C14orf166Q9Y224 244 aaKnown RBP8.58□□□□□ -1.04
CLIP1-204ENST00000501271 CDK2AP1O14519 115 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 RRP8O43159 456 aaKnown RBP8.57□□□□□ -1.04
CLIP1-204ENST00000501271 F10P00742 488 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 HTR5AP47898 357 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 RRADP55042 308 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 S100A10P60903 97 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 PSG4Q00888 419 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 DEFA5Q01523 94 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 NAAAQ02083 359 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 SCRN3Q0VDG4 424 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 PPA1Q15181 289 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 RSU1Q15404 277 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 KRTAP27-1Q3LI81 207 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 RTL6Q6ICC9 239 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 ESX1Q8N693 406 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 OR10D3Q8NH80 312 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 CPT1CQ8TCG5 803 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 KCNE4Q8WWG9 221 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 TMEM100Q9NV29 134 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 GSKIPQ9P0R6 139 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 ANXA10Q9UJ72 324 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 TCFL5Q9UL49 500 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 FREM1Q5H8C1 2179 aa8.57□□□□□ -1.04
CLIP1-204ENST00000501271 IGKV1-12A0A0C4DH73 117 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 PINLYPA6NC86 204 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 DNASE2O00115 360 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 TRAPPC6AO75865 159 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF205O95201 554 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ACTL6AO96019 429 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 IFNA2P01563 188 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 IGKV1D-12P01611 117 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 CSTBP04080 98 aaKnown RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 AIMP2Q13155 320 aaKnown RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 RBM39Q14498 530 aaKnown RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 CNN3Q15417 329 aaKnown RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 CEACAM16Q2WEN9 425 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF585AQ6P3V2 769 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF845Q96IR2 970 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 FOXB1Q99853 325 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 SULT4A1Q9BR01 284 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 WNT5BQ9H1J7 359 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 C12orf4Q9NQ89 552 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ZDBF2Q9HCK1 2354 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 FAM74A7A6NL05 159 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 LAMTOR5O43504 91 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 SFTPBP07988 381 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 FAM157CP0CG43 387 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 CD79AP11912 226 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ADCYAP1P18509 176 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 OPRM1P35372 400 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 RBMXP38159 391 aaKnown RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 RBP2P50120 134 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms