RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 OR8A1Q8NGG7 326 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 FAM57AQ8TBR7 257 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 CA5BP1Q8WTZ4 195 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 RBPMSQ93062 196 aaKnown RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 C9orf72Q96LT7 481 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 ZNF75AQ96N20 296 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 DERL3Q96Q80 235 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 NAPGQ99747 312 aaPredicted RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 NAA50Q9GZZ1 169 aaKnown RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 STMN4Q9H169 189 aaPredicted RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 EXO5Q9H790 373 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 REEP1Q9H902 201 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 PRSS16Q9NQE7 514 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 TMEM100Q9NV29 134 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 NDRG2Q9UN36 371 aaKnown RBP1.08□□□□□ -2.24
SMC4-227ENST00000497984 PPIL1Q9Y3C6 166 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 PHLPP2Q6ZVD8 1323 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 VWDEQ8N2E2 1590 aa1.08□□□□□ -2.24
SMC4-227ENST00000497984 ZNF608Q9ULD9 1512 aaPredicted RBP1.07□□□□□ -2.24
SMC4-227ENST00000497984 LRRIQ4A6NIV6 560 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 WRBO00258 174 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 MPDU1O75352 247 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 CTAG2O75638 210 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 OR4Q2P0C623 313 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 CSRP1P21291 193 aaKnown RBP1.07□□□□□ -2.24
SMC4-227ENST00000497984 CD82P27701 267 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 GPR1P46091 355 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 LGALS7P47929 136 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ATP6V0D1P61421 351 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 DEFB103AP81534 67 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 C2orf54Q08AI8 447 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ENDOGQ14249 297 aaKnown RBP1.07□□□□□ -2.24
SMC4-227ENST00000497984 C5orf64Q2M2E5 130 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 LGALSLQ3ZCW2 172 aaPredicted RBP1.07□□□□□ -2.24
SMC4-227ENST00000497984 FBXL19-AS1Q494R0 122 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 TMEM144Q7Z5S9 345 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 KATNAL2Q8IYT4 538 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ZCCHC24Q8N2G6 241 aaKnown RBP1.07□□□□□ -2.24
SMC4-227ENST00000497984 KIF2BQ8N4N8 673 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 RNF170Q96K19 258 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 MYCBPQ99417 103 aaPredicted RBP1.07□□□□□ -2.24
SMC4-227ENST00000497984 TMEM175Q9BSA9 504 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 DEFB129Q9H1M3 183 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ABCB9Q9NP78 766 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 VAX2Q9UIW0 290 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ACOT9Q9Y305 439 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 OR51B2Q9Y5P1 312 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ELP1O95163 1332 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 PLEKHG2Q9H7P9 1386 aa1.07□□□□□ -2.24
SMC4-227ENST00000497984 ZNF99A8MXY4 864 aaPredicted RBP1.06□□□□□ -2.24
SMC4-227ENST00000497984 C9JQL5 133 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 TTC4O95801 387 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 FGF4P08620 206 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 PTHLHP12272 177 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 HLA-GP17693 338 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 PRPS1L1P21108 318 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 GALP22466 123 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 SLC6A1P30531 599 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 TUFMP49411 452 aaKnown RBP1.06□□□□□ -2.24
SMC4-227ENST00000497984 CLDN18P56856 261 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 RAB11AP62491 216 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 DNAJC3Q13217 504 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 IL18Q14116 193 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 CLEC2AQ6UVW9 174 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 NDUFAF7Q7L592 441 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 MICU2Q8IYU8 434 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 DAW1Q8N136 415 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 BPIFB6Q8NFQ5 453 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 OR5H2Q8NGV7 314 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 OR10Z1Q8NGY1 313 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 OR5P3Q8WZ94 311 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 ARV1Q9H2C2 271 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 PXMP2Q9NR77 195 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 LOXHD1Q8IVV2 1947 aa1.06□□□□□ -2.24
SMC4-227ENST00000497984 TRAV8-6A0A0B4J262 113 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 SLC22A20A6NK97 555 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 GOLGA8TH3BQL2 631 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 CXorf1O96002 111 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 SEC11BP0C7V7 166 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ARL14EPLP0DKL9 152 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ANXA8P13928 327 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 CFHR2P36980 270 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 PAFAH1B2P68402 229 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 RPL18AQ02543 176 aaKnown RBP1.05□□□□□ -2.24
SMC4-227ENST00000497984 GBE1Q04446 702 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ANXA8L1Q5VT79 327 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 CLEC18BQ6UXF7 455 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 SLC7A5P1Q8MH63 180 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 TRAM1L1Q8N609 369 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ZDHHC22Q8N966 263 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 INO80EQ8NBZ0 244 aaPredicted RBP1.05□□□□□ -2.24
SMC4-227ENST00000497984 ISOC2Q96AB3 205 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ISG20Q96AZ6 181 aaKnown RBP1.05□□□□□ -2.24
SMC4-227ENST00000497984 PPP1R36Q96LQ0 422 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 GABRG3Q99928 467 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 THTPAQ9BU02 230 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 OR51B5Q9H339 312 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ZNF337Q9Y3M9 751 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ICOSQ9Y6W8 199 aa1.05□□□□□ -2.24
SMC4-227ENST00000497984 ENPP4Q9Y6X5 453 aa1.05□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms