RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 SMIM3Q9BZL3 60 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 THAP10Q9P2Z0 257 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 C19orf53Q9UNZ5 99 aaPredicted RBP8.01□□□□□ -1.13
HPS4-217ENST00000496385 NUMA1Q14980 2115 aa8.01□□□□□ -1.13
HPS4-217ENST00000496385 A0A1W2PQF6 199 aa8□□□□□ -1.13
HPS4-217ENST00000496385 C20orf202A1L168 122 aa8□□□□□ -1.13
HPS4-217ENST00000496385 SYNDIG1LA6NDD5 238 aa8□□□□□ -1.13
HPS4-217ENST00000496385 NKX6-3A6NJ46 265 aa8□□□□□ -1.13
HPS4-217ENST00000496385 PRR33A8MZF0 331 aa8□□□□□ -1.13
HPS4-217ENST00000496385 HSBP1L1C9JCN9 74 aa8□□□□□ -1.13
HPS4-217ENST00000496385 ETV2O00321 342 aaPredicted RBP8□□□□□ -1.13
HPS4-217ENST00000496385 HPRT1P00492 218 aa8□□□□□ -1.13
HPS4-217ENST00000496385 IRF2P14316 349 aa8□□□□□ -1.13
HPS4-217ENST00000496385 ROM1Q03395 351 aa8□□□□□ -1.13
HPS4-217ENST00000496385 COL10A1Q03692 680 aa8□□□□□ -1.13
HPS4-217ENST00000496385 GPR18Q14330 331 aa8□□□□□ -1.13
HPS4-217ENST00000496385 FZD2Q14332 565 aa8□□□□□ -1.13
HPS4-217ENST00000496385 ZNF266Q14584 549 aa8□□□□□ -1.13
HPS4-217ENST00000496385 TRMT12Q53H54 448 aaKnown RBP8□□□□□ -1.13
HPS4-217ENST00000496385 ZNF705AQ6ZN79 300 aaPredicted RBP8□□□□□ -1.13
HPS4-217ENST00000496385 MRPL41Q8IXM3 137 aaKnown RBP8□□□□□ -1.13
HPS4-217ENST00000496385 TMEM156Q8N614 296 aa8□□□□□ -1.13
HPS4-217ENST00000496385 CSNK1A1LQ8N752 337 aa8□□□□□ -1.13
HPS4-217ENST00000496385 OR6N2Q8NGY6 317 aa8□□□□□ -1.13
HPS4-217ENST00000496385 OTOSQ8NHW6 89 aa8□□□□□ -1.13
HPS4-217ENST00000496385 DNAJC4Q9NNZ3 241 aa8□□□□□ -1.13
HPS4-217ENST00000496385 TM7SF3Q9NS93 570 aa8□□□□□ -1.13
HPS4-217ENST00000496385 TAS2R4Q9NYW5 299 aa8□□□□□ -1.13
HPS4-217ENST00000496385 MMP17Q9ULZ9 603 aa8□□□□□ -1.13
HPS4-217ENST00000496385 B3GALT5Q9Y2C3 310 aa8□□□□□ -1.13
HPS4-217ENST00000496385 POLR3KQ9Y2Y1 108 aaPredicted RBP8□□□□□ -1.13
HPS4-217ENST00000496385 RHBDD3Q9Y3P4 386 aa8□□□□□ -1.13
HPS4-217ENST00000496385 A0A1W2PPV9 198 aa8□□□□□ -1.13
HPS4-217ENST00000496385 LAMTOR5O43504 91 aa8□□□□□ -1.13
HPS4-217ENST00000496385 PPBPP02775 128 aa8□□□□□ -1.13
HPS4-217ENST00000496385 UMODP07911 640 aa8□□□□□ -1.13
HPS4-217ENST00000496385 FUT3P21217 361 aa8□□□□□ -1.13
HPS4-217ENST00000496385 HSD11B1P28845 292 aa8□□□□□ -1.13
HPS4-217ENST00000496385 ACAA2P42765 397 aaKnown RBP8□□□□□ -1.13
HPS4-217ENST00000496385 OR3A2P47893 321 aa8□□□□□ -1.13
HPS4-217ENST00000496385 CXCL12P48061 93 aa8□□□□□ -1.13
HPS4-217ENST00000496385 CSNK1A1P48729 337 aa8□□□□□ -1.13
HPS4-217ENST00000496385 DNASE1L1P49184 302 aa8□□□□□ -1.13
HPS4-217ENST00000496385 FAM3BP58499 235 aaPredicted RBP8□□□□□ -1.13
HPS4-217ENST00000496385 HIST1H3AP68431 136 aa8□□□□□ -1.13
HPS4-217ENST00000496385 PRDX1Q06830 199 aaKnown RBP8□□□□□ -1.13
HPS4-217ENST00000496385 TRA2AQ13595 282 aaKnown RBP eCLIP8□□□□□ -1.13
HPS4-217ENST00000496385 LRRC73Q5JTD7 316 aa8□□□□□ -1.13
HPS4-217ENST00000496385 C1orf210Q8IVY1 113 aa8□□□□□ -1.13
HPS4-217ENST00000496385 MAML2Q8IZL2 1156 aaPredicted RBP8□□□□□ -1.13
HPS4-217ENST00000496385 CYB561D1Q8N8Q1 229 aa8□□□□□ -1.13
HPS4-217ENST00000496385 OR2D3Q8NGH3 330 aa8□□□□□ -1.13
HPS4-217ENST00000496385 OR5AR1Q8NGP9 310 aa8□□□□□ -1.13
HPS4-217ENST00000496385 OR14L1PQ8NHC6 308 aa8□□□□□ -1.13
HPS4-217ENST00000496385 ZCCHC10Q8TBK6 192 aa8□□□□□ -1.13
HPS4-217ENST00000496385 ORAOV1Q8WV07 137 aa8□□□□□ -1.13
HPS4-217ENST00000496385 EXTL1Q92935 676 aa8□□□□□ -1.13
HPS4-217ENST00000496385 NAGKQ9UJ70 344 aa8□□□□□ -1.13
HPS4-217ENST00000496385 HHLA2Q9UM44 414 aa8□□□□□ -1.13
HPS4-217ENST00000496385 HIF3AQ9Y2N7 669 aa8□□□□□ -1.13
HPS4-217ENST00000496385 CDC14CA4D256 554 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ZNF860A6NHJ4 632 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 A6NNC1 897 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 TNFSF13O75888 250 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ISG15P05161 165 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 TAS2R46P59540 309 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 MRPS21P82921 87 aaKnown RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 OR5I1Q13606 314 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ENPP2Q13822 863 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 KCTD18Q6PI47 426 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 SPEM1Q8N4L4 309 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 DEFB119Q8N690 84 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 TSTD1Q8NFU3 115 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 OR5H2Q8NGV7 314 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 OR2J1Q9GZK6 312 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 WFDC1Q9HC57 220 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 CGGBP1Q9UFW8 167 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 C14orf166Q9Y224 244 aaKnown RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 COLEC10Q9Y6Z7 277 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 MUC22E2RYF6 1773 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 TRAV1-1A0A0B4J248 108 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 TRBV11-1A0A0K0K1C0 115 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 DCDC2BA2VCK2 349 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 NXPH2O95156 264 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 DIRAS3O95661 229 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 RENP00797 406 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 OPN1LWP04000 364 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GRK6P43250 576 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ALDH3B1P43353 468 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 QRFPP83859 136 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 PSG6Q00889 435 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 TMEM182Q6ZP80 229 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 ZNF765Q7L2R6 523 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 DPY19L4Q7Z388 723 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GRINAQ7Z429 371 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GCNT2Q8N0V5 402 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ARHGEF39Q8N4T4 335 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 C2orf73Q8N5S3 287 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 KCNE4Q8WWG9 221 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 SPACA7Q96KW9 195 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms