RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 OR8G3PP0DMU2 310 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 PPIAL4FP0DN26 164 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 NQO1P15559 274 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 AQP1P29972 269 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 CRYBB2P43320 205 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 BIDP55957 195 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 TMEM33P57088 247 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 RGS8P57771 180 aaPredicted RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 NCALDP61601 193 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 LCN2P80188 198 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 CBX1P83916 185 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 PAX2Q02962 417 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 FMODQ06828 376 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 RBBP4Q09028 425 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 IFFO1Q0D2I5 559 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 STX3Q13277 289 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 PMS2P3Q13401 168 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 GPR50Q13585 617 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 RBM39Q14498 530 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 OPCMLQ14982 345 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 OR1Q1Q15612 314 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 KRT71Q3SY84 523 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 C10orf128Q5T292 105 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ACSM5Q6NUN0 579 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ZNF774Q6NX45 483 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 FAHD2BQ6P2I3 314 aaPredicted RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 LEG1Q6P5S2 330 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ULK3Q6PHR2 472 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 DHRS11Q6UWP2 260 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 FOXL2NBQ6ZUU3 175 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 C9orf139Q6ZV77 190 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 NET1Q7Z628 596 aaPredicted RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 FUNDC1Q8IVP5 155 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 BPIFB2Q8N4F0 458 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 SLC22A24Q8N4F4 322 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 SIGLECL1Q8N7X8 197 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 OR4K5Q8NGD3 323 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 OR6N1Q8NGY5 312 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 OR5J2Q8NH18 312 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 OR6X1Q8NH79 312 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 DNAJA4Q8WW22 397 aaPredicted RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 GEMIN6Q8WXD5 167 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 THRSPQ92748 146 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 FAHD2AQ96GK7 314 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 C4orf45Q96LM5 186 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ZBTB18Q99592 522 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 EPYCQ99645 322 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 ARHGDIGQ99819 225 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 GAL3ST1Q99999 423 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 RBM4BQ9BQ04 359 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 PRSS27Q9BQR3 290 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 MRPL13Q9BYD1 178 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 SLITRK2Q9H156 845 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 C1orf198Q9H425 327 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 RIBC2Q9H4K1 309 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 TMEM38AQ9H6F2 299 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 TMEM231Q9H6L2 316 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 B3GAT2Q9NPZ5 323 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 MEPEQ9NQ76 525 aaPredicted RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 TAS2R5Q9NYW4 299 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 GLTPQ9NZD2 209 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 VAPAQ9P0L0 249 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 TAAR3PQ9P1P4 343 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 PURGQ9UJV8 347 aaKnown RBP3.48□□□□□ -1.85
VPS52-222ENST00000495981 IFT52Q9Y366 437 aa3.48□□□□□ -1.85
VPS52-222ENST00000495981 KMT2AQ03164 3969 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 TRAV40A0A0B4J280 105 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 MDFIC2A0A1B0GVS7 189 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ERICH4A6NGS2 130 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 TRPC5OSA6NMA1 111 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 C11orf98E9PRG8 122 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 TRAPPC2LH3BP13 241 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 H3BSA7 217 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 KPNA4O00629 521 aaPredicted RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 SOCS2O14508 198 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ERLIN1O75477 346 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 CLN5O75503 358 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SLC2A10O95528 541 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ANP32DO95626 131 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SLPIP03973 132 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 OPN1SWP03999 348 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 TSPAN19P0C672 248 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 FRMD6-AS1P0C7T7 363 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 IGHV4-38-2P0DP08 117 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 THRBP10828 461 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 PRTN3P24158 256 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 PRDX2P32119 198 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 OR3A3P47888 321 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ERFP50548 548 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 POLR2JP52435 117 aaKnown RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 UGT2B15P54855 530 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SSTP61278 116 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 CDK6Q00534 326 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 MYBPC1Q00872 1141 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 RPL18Q07020 188 aaKnown RBP3.47□□□□□ -1.85
VPS52-222ENST00000495981 SELPLGQ14242 412 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 ZMYND11Q15326 602 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SPHARQ15513 63 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 FAM189A2Q15884 450 aa3.47□□□□□ -1.85
VPS52-222ENST00000495981 SRSF7Q16629 238 aaKnown RBP eCLIP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms