RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, human

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SUPT20H-222	ENST00000495071	C1orf196	B1AJZ1	125 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF806	P0C7X5	589 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SRF	P11831	508 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DVL1P1	P54792	670 aa	Predicted RBP	11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SLC25A53	Q5H9E4	307 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	KRBOX4	Q5JUW0	171 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	C20orf196	Q8IYI0	205 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	OR2AE1	Q8NHA4	323 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF385A	Q96PM9	386 aa	Known RBP	11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	METTL9	Q9H1A3	318 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	WDFY3	Q8IZQ1	3526 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PMS2P1	A4D2B8	440 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	LINC01387	J3KSC0	135 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF728	P0DKX0	622 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CBR1	P16152	277 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PTGDS	P41222	190 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ECI1	P42126	302 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF133	P52736	654 aa	Predicted RBP	11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TSPO2	Q5TGU0	170 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	BRICD5	Q6PL45	260 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SFT2D1	Q8WV19	159 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SHD	Q96IW2	340 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ANXA10	Q9UJ72	324 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	EDAR	Q9UNE0	448 aa		11.76	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MEX3A	A1L020	520 aa	Known RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DEDD	O75618	318 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	S100A9	P06702	114 aa	Known RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CTSD	P07339	412 aa	Predicted RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NAT2	P11245	290 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF84	P51523	738 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	LSM6	P62312	80 aa	Known RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MIDN	Q504T8	468 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	RHBDD1	Q8TEB9	315 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PARP11	Q9NR21	331 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	KLF2	Q9Y5W3	355 aa	Predicted RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DHH	O43323	396 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	APOC1	P02654	83 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ITGA3	P26006	1051 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MEOX2	P50222	304 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SNRPE	P62304	92 aa	Known RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SKA3	Q8IX90	412 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	WDSUB1	Q8N9V3	476 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	OR5L1	Q8NGL2	311 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CD300LF	Q8TDQ1	290 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	RTN4IP1	Q8WWV3	396 aa	Predicted RBP	11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GNRHR2	Q96P88	292 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CLCC1	Q96S66	551 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	KPTN	Q9Y664	436 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	IGLV3-12	A0A075B6K2	115 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CCDC85C	A6NKD9	419 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071		C9JQL5	133 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	LCAT	P04180	440 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CTAG1A	P78358	180 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	KCNMB1	Q16558	191 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	HSD17B11	Q8NBQ5	300 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	UCN2	Q96RP3	112 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DKKL1	Q9UK85	242 aa		11.75	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ETV2	O00321	342 aa	Predicted RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	OR5AC1	P0C628	307 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PNLIP	P16233	465 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	BTNL8	Q6UX41	500 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PLXDC2	Q6UX71	529 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	DYRK2	Q92630	601 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ERGIC1	Q969X5	290 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NECAP2	Q9NVZ3	263 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NCOA6	Q14686	2063 aa	Predicted RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071		A0A0U1RQV5	110 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MED19	A0JLT2	244 aa	Predicted RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	IL15RA	Q13261	267 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PHYHD1	Q5SRE7	291 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF574	Q6ZN55	896 aa	Predicted RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	BORCS8	Q96FH0	119 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PLEKHA2	Q9HB19	425 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	LUZP4	Q9P127	313 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CRYM-AS1	A6NIL9	109 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FCGR3A	P08637	254 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ZNF14	P17017	642 aa	Predicted RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SHB	Q15464	509 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	RPUSD3	Q6P087	351 aa	Known RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	GUSBP11	Q6P575	273 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	FBXW12	Q6X9E4	464 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MEX3B	Q6ZN04	569 aa	Known RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PPP1R3B	Q86XI6	285 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	USB1	Q9BQ65	265 aa	Known RBP	11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	CHRD	Q9H2X0	955 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	IFT22	Q9H7X7	185 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SPACA1	Q9HBV2	294 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	AK3	Q9UIJ7	227 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	AMDHD2	Q9Y303	409 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071	MTCH2	Q9Y6C9	303 aa		11.74	□□□□□ -0.53
SUPT20H-222	ENST00000495071		E5RGE8	158 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SPEM2	Q0P670	501 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	ENDOG	Q14249	297 aa	Known RBP	11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	PPA1	Q15181	289 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SNAI3	Q3KNW1	292 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TMEM268	Q5VZI3	342 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	REEP6	Q96HR9	211 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	NAA11	Q9BSU3	229 aa	Predicted RBP	11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	TM2D1	Q9BX74	207 aa		11.73	□□□□□ -0.53
SUPT20H-222	ENST00000495071	SEMA5B	Q9P283	1151 aa		11.73	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms