RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 KAAG1Q9UBP8 84 aa13.26□□□□□ -0.29
LIME1-209ENST00000494776 OR2AT4A6NND4 320 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 H0YJX3 145 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 SYNGR1O43759 233 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 ENSAO43768 121 aaKnown RBP13.25□□□□□ -0.29
LIME1-209ENST00000494776 XPNPEP2O43895 674 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 GTF2A1P52655 376 aaPredicted RBP13.25□□□□□ -0.29
LIME1-209ENST00000494776 IKZF1Q13422 519 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 OR2G6Q5TZ20 316 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 POC1AQ8NBT0 407 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 OR10AC1Q8NH08 325 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 TSEN15Q8WW01 171 aaKnown RBP13.25□□□□□ -0.29
LIME1-209ENST00000494776 MED30Q96HR3 178 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 PDCD1LG2Q9BQ51 273 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 RASL12Q9NYN1 266 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 CNOT2Q9NZN8 540 aaKnown RBP13.25□□□□□ -0.29
LIME1-209ENST00000494776 OPN4Q9UHM6 478 aa13.25□□□□□ -0.29
LIME1-209ENST00000494776 KIR2DS1A0A191URI9 304 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 NXPH2O95156 264 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 ZFPL1O95159 310 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 ECDO95905 644 aaPredicted RBP13.24□□□□□ -0.29
LIME1-209ENST00000494776 PLATP00750 562 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 PIPP12273 146 aaPredicted RBP13.24□□□□□ -0.29
LIME1-209ENST00000494776 PRKACBP22694 351 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 RBP2P50120 134 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 ATP1B3P54709 279 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 PAX8Q06710 450 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 SMIM21Q3B7S5 101 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 CCDC58Q4VC31 144 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 LRRC10Q5BKY1 277 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 STUMQ69YW2 141 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 RPL22L1Q6P5R6 122 aaKnown RBP13.24□□□□□ -0.29
LIME1-209ENST00000494776 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 UTS2BQ765I0 119 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 BTN2A1Q7KYR7 527 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 FAM216BQ8N7L0 139 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 PNLDC1Q8NA58 520 aaKnown RBP13.24□□□□□ -0.29
LIME1-209ENST00000494776 OR51A4Q8NGJ6 313 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 GATAD2BQ8WXI9 593 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 ZNF488Q96MN9 340 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 PKIBQ9C010 78 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 DNTTIP1Q9H147 329 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 NEK6Q9HC98 313 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 SMURF1Q9HCE7 757 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 PLCXD1Q9NUJ7 323 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 BABAM2Q9NXR7 383 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 CLEC2DQ9UHP7 191 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 DHDHQ9UQ10 334 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 ARHGAP32A7KAX9 2087 aa13.24□□□□□ -0.29
LIME1-209ENST00000494776 A0A1B0GW55 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 C22orf46C9J442 243 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 INMTO95050 263 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 CYB5AP00167 134 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 LIPFP07098 398 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L2P0CJ85 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L3P0CJ86 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L4P0CJ87 422 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L5P0CJ88 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L6P0CJ89 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L7P0CJ90 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 PGA5P0DJD9 388 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 ATF1P18846 271 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 EPHA1P21709 976 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 MTCP1P56278 107 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 IL13RA1P78552 427 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 PAX2Q02962 417 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 IL24Q13007 206 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 ATPAF1Q5TC12 328 aaPredicted RBP13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4L9Q6RFH8 374 aaPredicted RBP13.23□□□□□ -0.29
LIME1-209ENST00000494776 ACP7Q6ZNF0 438 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 CALHM1Q8IU99 346 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 BATF2Q8N1L9 274 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 OR52N1Q8NH53 320 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 ANGPTL6Q8NI99 470 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 FBLIM1Q8WUP2 373 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 DUX4Q9UBX2 424 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 PSORS1C1Q9UIG5 152 aa13.23□□□□□ -0.29
LIME1-209ENST00000494776 MYL12BO14950 172 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 GPR37O15354 613 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 NOS1APO75052 506 aaPredicted RBP13.22□□□□□ -0.29
LIME1-209ENST00000494776 ATP6V1G2O95670 118 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 TFF1P04155 84 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 PSG2P11465 335 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 MPZP25189 248 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 AZGP1P25311 298 aaKnown RBP13.22□□□□□ -0.29
LIME1-209ENST00000494776 HSPA13P48723 471 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 CAPZA1P52907 286 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 CDK5R1Q15078 307 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 LAIR2Q6ISS4 152 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 ZNF788Q6ZQV5 615 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 LHFPL2Q6ZUX7 228 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 SERPINA12Q8IW75 414 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 DNAAF1Q8NEP3 725 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 OR5D14Q8NGL3 314 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 OR13C9Q8NGT0 318 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 H1FXQ92522 213 aaKnown RBP13.22□□□□□ -0.29
LIME1-209ENST00000494776 SPSB1Q96BD6 273 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 OPALINQ96PE5 141 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 GAFA1Q96PS6 74 aa13.22□□□□□ -0.29
LIME1-209ENST00000494776 ZCCHC4Q9H5U6 513 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms