RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 V9GYS6 101 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 KIAA2026Q5HYC2 2103 aa9.5□□□□□ -0.89
VTI1A-208ENST00000494728 PLXNB1O43157 2135 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 PQLC2LA1A4F0 135 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 MEX3AA1L020 520 aaKnown RBP9.49□□□□□ -0.89
VTI1A-208ENST00000494728 ACOD1A6NK06 481 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 LOC110117498-PIK3R3F6TDL0 507 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 ZNF254O75437 659 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 MTRF1O75570 445 aaKnown RBP9.49□□□□□ -0.89
VTI1A-208ENST00000494728 CLPXO76031 633 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 POLR2IP36954 125 aaKnown RBP9.49□□□□□ -0.89
VTI1A-208ENST00000494728 ESRRGP62508 458 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 GUCA2AQ02747 115 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 RIPPLY1Q0D2K3 151 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 BCL2L15Q5TBC7 163 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 ZBTB37Q5TC79 503 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 NXNL2Q5VZ03 156 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 KDM4DQ6B0I6 523 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 THAP5Q7Z6K1 395 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 MKXQ8IYA7 352 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 OR5A2Q8NGI9 324 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 OR14K1Q8NGZ2 314 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 TMEM163Q8TC26 289 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 ASB17Q8WXJ9 295 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 MED30Q96HR3 178 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 DMRTB1Q96MA1 342 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 HIST1H2AAQ96QV6 131 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 TBX5Q99593 518 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 CIB1Q99828 191 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 METTL8Q9H825 291 aaKnown RBP9.49□□□□□ -0.89
VTI1A-208ENST00000494728 ENPP5Q9UJA9 477 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 FAM96BQ9Y3D0 163 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 R4GMQ9 66 aa9.49□□□□□ -0.89
VTI1A-208ENST00000494728 IGKV1-27A0A075B6S5 117 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 RFPL4AA6NLU0 287 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 RFPL4AL1F8VTS6 287 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 F8VVB4 439 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 F8VWA3 439 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 J3QT63 122 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 NRASP01111 189 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 ATP6V1B1P15313 513 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 CCL3L1P16619 93 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 HAAOP46952 286 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 BMXP51813 675 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 UBE2E1P51965 193 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 BNIP1Q12981 228 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 ZNF273Q14593 569 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 ODF4Q2M2E3 257 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 MIDNQ504T8 468 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 DHRS7BQ6IAN0 325 aaPredicted RBP9.48□□□□□ -0.89
VTI1A-208ENST00000494728 GDPGP1Q6ZNW5 385 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 Q6ZSR3 168 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 AMIGO2Q86SJ2 522 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 ELMOD2Q8IZ81 293 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 OR4M1Q8NGD0 313 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 OR51G2Q8NGK0 314 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 PPP1R35Q8TAP8 253 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 NPRL2Q8WTW4 380 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 LRTOMTQ8WZ04 291 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 RBM4BQ9BQ04 359 aaKnown RBP9.48□□□□□ -0.89
VTI1A-208ENST00000494728 NRIP2Q9BQI9 281 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 DPAGT1Q9H3H5 408 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 MOB1AQ9H8S9 216 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 HES4Q9HCC6 221 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 CLN6Q9NWW5 311 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 OR52A1Q9UKL2 312 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 SIGLEC9Q9Y336 463 aa9.48□□□□□ -0.89
VTI1A-208ENST00000494728 TRBV23-1A0A0A0MS06 115 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 SLC22A31A6NKX4 558 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 G3V2T6 193 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 H3BUX3 64 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 ANGPTL7O43827 346 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 CHST1O43916 411 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 TSPAN9O75954 239 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 RPP14O95059 124 aaKnown RBP9.47□□□□□ -0.89
VTI1A-208ENST00000494728 PAHP00439 452 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 CCL1P22362 96 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 EEF1B2P24534 225 aaKnown RBP9.47□□□□□ -0.89
VTI1A-208ENST00000494728 MPZP25189 248 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 CAPZA1P52907 286 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 EGR3Q06889 387 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 LY6EQ16553 131 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 SMIM21Q3B7S5 101 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 PDLIM3Q53GG5 364 aaPredicted RBP9.47□□□□□ -0.89
VTI1A-208ENST00000494728 CLVS2Q5SYC1 327 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 LDLRAD2Q5SZI1 272 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 ZNF684Q5T5D7 378 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 NCR3LG1Q68D85 454 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 CRIP3Q6Q6R5 217 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 C1orf122Q6ZSJ8 110 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 ASRGL1Q7L266 308 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 TCF23Q7RTU1 214 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 CATSPERDQ86XM0 798 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 ANGPTL5Q86XS5 388 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 BEND2Q8NDZ0 799 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 TRMT10AQ8TBZ6 339 aaKnown RBP9.47□□□□□ -0.89
VTI1A-208ENST00000494728 TEX12Q9BXU0 123 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 PPA2Q9H2U2 334 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 C16orf95Q9H693 158 aa9.47□□□□□ -0.89
VTI1A-208ENST00000494728 IL36RNQ9UBH0 155 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms