RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 RASL12Q9NYN1 266 aa27.37■■□□□ 1.97
CBX4-203ENST00000494546 DAPL1A0PJW8 107 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 HKR1P10072 659 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 ACTC1P68032 377 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 ACTA1P68133 377 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 PQLC1Q8N2U9 271 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 ZNRF1Q8ND25 227 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 TMEM185AQ8NFB2 350 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 TRMT10AQ8TBZ6 339 aaKnown RBP27.36■■□□□ 1.97
CBX4-203ENST00000494546 SLC29A1Q99808 456 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 ZNF222Q9UK12 451 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 POLDIP2Q9Y2S7 368 aa27.36■■□□□ 1.97
CBX4-203ENST00000494546 ANK2Q01484 3957 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 ISL1P61371 349 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 SMIM21Q3B7S5 101 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 ACP7Q6ZNF0 438 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 ZBTB49Q6ZSB9 765 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 NPRL2Q8WTW4 380 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 PRDM13Q9H4Q3 707 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 ELL3Q9HB65 397 aaPredicted RBP27.35■■□□□ 1.97
CBX4-203ENST00000494546 TNFRSF19Q9NS68 423 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 SLC7A11Q9UPY5 501 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 MAB21L2Q9Y586 359 aa27.35■■□□□ 1.97
CBX4-203ENST00000494546 FAM230AA0A1W2PPH8 454 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 SNTNA6NMZ2 147 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 PGA5P0DJD9 388 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 KIR3DL2P43630 455 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 CAV3P56539 151 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 RDH10Q8IZV5 341 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 BATF2Q8N1L9 274 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 C8orf46Q8TAG6 207 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 DMRTB1Q96MA1 342 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 NOX4Q9NPH5 578 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 SIRT7Q9NRC8 400 aa27.34■■□□□ 1.97
CBX4-203ENST00000494546 LOC107986453A0A1B0GWG9 222 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 A0A1W2PQ09 198 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 RFPL4AA6NLU0 287 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 RFPL4AL1F8VTS6 287 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 J3QRE1 110 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 CAPZA1P52907 286 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 FOXL1Q12952 345 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 ANGPTL5Q86XS5 388 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 KIR3DL3Q8N743 410 aa27.33■■□□□ 1.97
CBX4-203ENST00000494546 NXPH2O95156 264 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 BAG2O95816 211 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 UBCP0CG48 685 aaKnown RBP27.32■■□□□ 1.96
CBX4-203ENST00000494546 OR12D2P58182 307 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 PRB3Q04118 309 aaPredicted RBP27.32■■□□□ 1.96
CBX4-203ENST00000494546 Q6YL49 198 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 KCTD20Q7Z5Y7 419 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 CALHM1Q8IU99 346 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 ENTHD1Q8IYW4 607 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 CCDC54Q8NEL0 328 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 RNF166Q96A37 237 aaPredicted RBP27.32■■□□□ 1.96
CBX4-203ENST00000494546 SDSLQ96GA7 329 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 PCDHGB1Q9Y5G3 927 aa27.32■■□□□ 1.96
CBX4-203ENST00000494546 SLC16A6O15403 523 aa27.31■■□□□ 1.96
CBX4-203ENST00000494546 NOS1APO75052 506 aaPredicted RBP27.31■■□□□ 1.96
CBX4-203ENST00000494546 UBE2V2Q15819 145 aa27.31■■□□□ 1.96
CBX4-203ENST00000494546 ACBD7Q8N6N7 88 aa27.31■■□□□ 1.96
CBX4-203ENST00000494546 OR2G2Q8NGZ5 317 aa27.31■■□□□ 1.96
CBX4-203ENST00000494546 NRIP2Q9BQI9 281 aa27.31■■□□□ 1.96
CBX4-203ENST00000494546 EXOGQ9Y2C4 368 aaKnown RBP27.31■■□□□ 1.96
CBX4-203ENST00000494546 GATBO75879 557 aaKnown RBP27.3■■□□□ 1.96
CBX4-203ENST00000494546 GABRB1P18505 474 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 DLX1P56177 255 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 ZNF91Q05481 1191 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 C16orf87Q6PH81 154 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 CD177Q8N6Q3 437 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 Q8N7P7 452 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 TAF15Q92804 592 aaKnown RBP eCLIP27.3■■□□□ 1.96
CBX4-203ENST00000494546 LGALS12Q96DT0 336 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 PKIBQ9C010 78 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 CHST5Q9GZS9 411 aa27.3■■□□□ 1.96
CBX4-203ENST00000494546 A0A0U1RQK1 487 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 SERPINA3P01011 423 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 MELTFP08582 738 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 MPZP25189 248 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 PRDX2P32119 198 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 CEBPDP49716 269 aaPredicted RBP27.29■■□□□ 1.96
CBX4-203ENST00000494546 FRRS1LQ9P0K9 344 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 OR14J1Q9UGF5 321 aa27.29■■□□□ 1.96
CBX4-203ENST00000494546 LOC100130705A0A1B0GUX0 176 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 J3QLW9 94 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 MPZL2O60487 215 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 DBTP11182 482 aaKnown RBP27.28■■□□□ 1.96
CBX4-203ENST00000494546 ZNF19P17023 458 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 TMEM244Q5VVB8 128 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 FAM185AQ8N0U4 392 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 PIP4P2Q8N4L2 257 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 Q96MT0 163 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 AMBNQ9NP70 447 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 FAM118AQ9NWS6 357 aa27.28■■□□□ 1.96
CBX4-203ENST00000494546 SLC1A7O00341 560 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 HTR1AP08908 422 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 FUT6P51993 359 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 NANOS3P60323 173 aaKnown RBP27.27■■□□□ 1.96
CBX4-203ENST00000494546 IL24Q13007 206 aa27.27■■□□□ 1.96
CBX4-203ENST00000494546 METAP1DQ6UB28 335 aaPredicted RBP27.27■■□□□ 1.96
CBX4-203ENST00000494546 RHOXF1Q8NHV9 184 aa27.27■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms