RNA–Protein interactions for RNA: ENST00000494132.1

ATG4B-224, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 828 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-224ENST00000494132 IGKV1-27A0A075B6S5 117 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 J3QT63 122 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 WBP4O75554 376 aaKnown RBP12.14□□□□□ -0.47
ATG4B-224ENST00000494132 UBCP0CG48 685 aaKnown RBP12.14□□□□□ -0.47
ATG4B-224ENST00000494132 MMP9P14780 707 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 NDUFB7P17568 137 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 IL13RA1P78552 427 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 LRRC10Q5BKY1 277 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 RBMS3Q6XE24 437 aaKnown RBP12.14□□□□□ -0.47
ATG4B-224ENST00000494132 ACP7Q6ZNF0 438 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 USP43Q70EL4 1123 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 PNLDC1Q8NA58 520 aaKnown RBP12.14□□□□□ -0.47
ATG4B-224ENST00000494132 POC1AQ8NBT0 407 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 ZNRF1Q8ND25 227 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 TMEM185AQ8NFB2 350 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 OR51A4Q8NGJ6 313 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 ADAT3Q96EY9 351 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-224ENST00000494132 Q96MT0 163 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 WDFY2Q96P53 400 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 SIRPDQ9H106 197 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 ONECUT1Q9UBC0 465 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 SLC25A10Q9UBX3 287 aaPredicted RBP12.14□□□□□ -0.47
ATG4B-224ENST00000494132 PCDHGB1Q9Y5G3 927 aa12.14□□□□□ -0.47
ATG4B-224ENST00000494132 DNAJC9-AS1A6NH13 148 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 DHRS7CA6NNS2 312 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 E9PI62 339 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 TRIM77I1YAP6 450 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 PGA5P0DJD9 388 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 PPIAL4GP0DN37 164 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ACTA2P62736 377 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 UBA52P62987 128 aaKnown RBP12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ACTG1P63261 375 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ACTG2P63267 376 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 GALEQ14376 348 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ATPAF1Q5TC12 328 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-224ENST00000494132 GPR157Q5UAW9 335 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 METTL11BQ5VVY1 283 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ZNF573Q86YE8 665 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 CD177Q8N6Q3 437 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 LHX4Q969G2 390 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ITFG2Q969R8 447 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 C1orf147Q96MC9 270 aaPredicted RBP12.13□□□□□ -0.47
ATG4B-224ENST00000494132 JMJD8Q96S16 334 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ZNF649Q9BS31 505 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 DCTN5Q9BTE1 182 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 CHST5Q9GZS9 411 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 SIRT7Q9NRC8 400 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ERVK13-1Q9NX77 482 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 OR14J1Q9UGF5 321 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 ZNF222Q9UK12 451 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 SLC7A11Q9UPY5 501 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 MAB21L2Q9Y586 359 aa12.13□□□□□ -0.47
ATG4B-224ENST00000494132 CENPVL3A0A0U1RRI6 287 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 RFPL4AA6NLU0 287 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 RFPL4AL1F8VTS6 287 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 F8VVB4 439 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 F8VWA3 439 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 SIGLEC5O15389 551 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 NXPH2O95156 264 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 FADS2O95864 444 aaKnown RBP12.12□□□□□ -0.47
ATG4B-224ENST00000494132 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-224ENST00000494132 IGHA1P01876 353 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 LIPFP07098 398 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 ACAA1P09110 424 aaPredicted RBP12.12□□□□□ -0.47
ATG4B-224ENST00000494132 CAPZA1P52907 286 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 RAB40BQ12829 278 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 BAMBIQ13145 260 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 ALKBH1Q13686 389 aaKnown RBP12.12□□□□□ -0.47
ATG4B-224ENST00000494132 DEFB112Q30KQ8 113 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 ZNF691Q5VV52 312 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 TMEM244Q5VVB8 128 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 VMO1Q7Z5L0 202 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 KCTD20Q7Z5Y7 419 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 TAF15Q92804 592 aaKnown RBP eCLIP12.12□□□□□ -0.47
ATG4B-224ENST00000494132 SLAMF9Q96A28 289 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 FGGYQ96C11 551 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 BORCS8Q96FH0 119 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 RDH12Q96NR8 316 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 DNTTIP1Q9H147 329 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 CNTD2Q9H8S5 307 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 TNFRSF19Q9NS68 423 aa12.12□□□□□ -0.47
ATG4B-224ENST00000494132 RPL36Q9Y3U8 105 aaKnown RBP12.12□□□□□ -0.47
ATG4B-224ENST00000494132 KIAA2026Q5HYC2 2103 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 IGKV1-9A0A0C4DH69 117 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 OR4C45A6NMZ5 311 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 GATBO75879 557 aaKnown RBP12.11□□□□□ -0.47
ATG4B-224ENST00000494132 ZNF20P17024 532 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 MPZP25189 248 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 POU3F4P49335 361 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 GTF2A1P52655 376 aaPredicted RBP12.11□□□□□ -0.47
ATG4B-224ENST00000494132 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
ATG4B-224ENST00000494132 TUSC1Q2TAM9 212 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 SMIM21Q3B7S5 101 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 FDX2Q6P4F2 183 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 RNF144BQ7Z419 303 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 ZNF676Q8N7Q3 588 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 OR13C3Q8NGS6 347 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 RFT1Q96AA3 541 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 MED30Q96HR3 178 aa12.11□□□□□ -0.47
ATG4B-224ENST00000494132 HHLA2Q9UM44 414 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms