RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 C19orf24Q9BVV8 132 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 NAA50Q9GZZ1 169 aaKnown RBP10.3□□□□□ -0.76
UPF3A-210ENST00000493727 PLK3Q9H4B4 646 aa10.3□□□□□ -0.76
UPF3A-210ENST00000493727 ZNF275Q9NSD4 429 aaPredicted RBP10.3□□□□□ -0.76
UPF3A-210ENST00000493727 PURGQ9UJV8 347 aaKnown RBP10.3□□□□□ -0.76
UPF3A-210ENST00000493727 DHRS7CA6NNS2 312 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 GABARAPO95166 117 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 OR4A8P0C604 315 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 ZNF250P15622 560 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 ACKR3P25106 362 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 NR4A2P43354 598 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 ADIPOQQ15848 244 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 CLVS2Q5SYC1 327 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 FAM27D1Q5T7N8 215 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 PLCXD3Q63HM9 321 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 CD200R1LQ6Q8B3 271 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 TMEM91Q6ZNR0 172 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 SERPINA12Q8IW75 414 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 OR13C9Q8NGT0 318 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 RAB2BQ8WUD1 216 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 NEU4Q8WWR8 484 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-210ENST00000493727 PP6455Q8WZ26 134 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 PIGCQ92535 297 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 MRPL24Q96A35 216 aaKnown RBP10.29□□□□□ -0.76
UPF3A-210ENST00000493727 HAVCR1Q96D42 359 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 KCTD7Q96MP8 289 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 VRK1Q99986 396 aaPredicted RBP10.29□□□□□ -0.76
UPF3A-210ENST00000493727 CENPOQ9BU64 300 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 MRPL37Q9BZE1 423 aaKnown RBP10.29□□□□□ -0.76
UPF3A-210ENST00000493727 NEK6Q9HC98 313 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 TCF7L1Q9HCS4 588 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 BATF3Q9NR55 127 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 TXNL4BQ9NX01 149 aaKnown RBP10.29□□□□□ -0.76
UPF3A-210ENST00000493727 TAS2R4Q9NYW5 299 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 NDUFA13Q9P0J0 144 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 TAAR3PQ9P1P4 343 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 RHBDD3Q9Y3P4 386 aa10.29□□□□□ -0.76
UPF3A-210ENST00000493727 TRBV5-7A0A0A0MS05 114 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 PLSCR5A0PG75 271 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 DPPA5A6NC42 116 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ANKRD61A6NGH8 418 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ANXA2P2A6NMY6 339 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 IQCF6A8MYZ5 107 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 SC5DO75845 299 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 LY6HO94772 140 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 UCHL1P09936 223 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 SRD5A1P18405 259 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 RAB3AP20336 220 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 KITLGP21583 273 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 FGF9P31371 208 aaPredicted RBP10.28□□□□□ -0.76
UPF3A-210ENST00000493727 TMBIM6P55061 237 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 CNN3Q15417 329 aaKnown RBP10.28□□□□□ -0.76
UPF3A-210ENST00000493727 CARTPTQ16568 116 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ALKBH6Q3KRA9 238 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 UNQ9370/PRO34162Q6UXP9 181 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 Q6ZSR3 168 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 LRP11Q86VZ4 500 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ZDHHC23Q8IYP9 409 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 OR5D14Q8NGL3 314 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ISOC1Q96CN7 298 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ORAI1Q96D31 301 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 HIST1H2AAQ96QV6 131 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 CHST5Q9GZS9 411 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 ZCCHC4Q9H5U6 513 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 GPR173Q9NS66 373 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 MRPL15Q9P015 296 aaKnown RBP10.28□□□□□ -0.76
UPF3A-210ENST00000493727 NOP16Q9Y3C1 178 aaKnown RBP10.28□□□□□ -0.76
UPF3A-210ENST00000493727 CEPT1Q9Y6K0 416 aa10.28□□□□□ -0.76
UPF3A-210ENST00000493727 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 TENM1Q9UKZ4 2725 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF850A8MQ14 1090 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 MAGEB3O15480 346 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 NRASP01111 189 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 IGHV3-13P01766 116 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 HCKP08631 526 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 CA6P23280 308 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 SERPINB10P48595 397 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 EVX1P49640 407 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 VBP1P61758 197 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 NCS1P62166 190 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 SRSF2Q01130 221 aaKnown RBP10.27□□□□□ -0.77
UPF3A-210ENST00000493727 PRDX4Q13162 271 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 MLANAQ16655 118 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 CEP78Q5JTW2 689 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 SLC16A12Q6ZSM3 486 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 MOB3CQ70IA8 216 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 PARP16Q8N5Y8 322 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 OR8G5Q8NG78 346 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 OR8S1Q8NH09 359 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 ZNF420Q8TAQ5 688 aaPredicted RBP10.27□□□□□ -0.77
UPF3A-210ENST00000493727 NPRL2Q8WTW4 380 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 BCL7BQ9BQE9 202 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 ADAT1Q9BUB4 502 aaKnown RBP10.27□□□□□ -0.77
UPF3A-210ENST00000493727 SLC22A4Q9H015 551 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 RNF167Q9H6Y7 350 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 ABCB9Q9NP78 766 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 DYNLRB1Q9NP97 96 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 CYSLTR2Q9NS75 346 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 TMEM100Q9NV29 134 aa10.27□□□□□ -0.77
UPF3A-210ENST00000493727 MYEF2Q9P2K5 600 aaKnown RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms