RNA–Protein interactions for RNA: ENST00000493613.5

NUDCD3-210, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-210ENST00000493613 SMIM21Q3B7S5 101 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 HIST2H2BDQ6DRA6 164 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 DEGS2Q6QHC5 323 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 ACP7Q6ZNF0 438 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 KRT74Q7RTS7 529 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 MKXQ8IYA7 352 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 ZNF561Q8N587 486 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 KLHDC1Q8N7A1 406 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 OR5K1Q8NHB7 308 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 PPP1R14AQ96A00 147 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 AJUBAQ96IF1 538 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 ZNF488Q96MN9 340 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 TEAD3Q99594 435 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 YIPF3Q9GZM5 350 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 MEGF9Q9H1U4 602 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 RANBP3Q9H6Z4 567 aaPredicted RBP8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 RAB18Q9NP72 206 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 RASL12Q9NYN1 266 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 IKZF2Q9UKS7 526 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 GTF2A1LQ9UNN4 478 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 FOXJ3Q9UPW0 622 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 PIGLQ9Y2B2 252 aa8.35□□□□□ -1.07
NUDCD3-210ENST00000493613 hCG_1809904A0A1W2PP81 198 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 A0A1W2PPE2 198 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 A0A1W2PR64 198 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 A0A1W2PRV1 198 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 CCDC182A6NF36 153 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 RFPL4AA6NLU0 287 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 PRR32B1ATL7 298 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 RFPL4AL1F8VTS6 287 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 CHST1O43916 411 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 FKBP6O75344 327 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ZNF254O75437 659 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 MTRF1O75570 445 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ATP6V1B1P15313 513 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 HOXB6P17509 224 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 LGALS4P56470 323 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 RPL31P62899 125 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ROM1Q03395 351 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 MFGE8Q08431 387 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 FLOT2Q14254 428 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 BEAN1Q3B7T3 259 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ZNF829Q3KNS6 432 aaPredicted RBP8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ZNF684Q5T5D7 378 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ZBTB37Q5TC79 503 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 LCN1P1Q5VSP4 162 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 TMEM200BQ69YZ2 307 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 CRIP3Q6Q6R5 217 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 C10orf67Q8IYJ2 551 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ZNF679Q8IYX0 411 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 CD177Q8N6Q3 437 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 POC1AQ8NBT0 407 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ASB17Q8WXJ9 295 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 CFHR4Q92496 578 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ITFG2Q969R8 447 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 OR8B4Q96RC9 309 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 NPFFR1Q9GZQ6 430 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 HEXA-AS1Q9H8Q6 139 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 SLC25A19Q9HC21 320 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 PAPOLBQ9NRJ5 636 aaKnown RBP8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 DNAJB9Q9UBS3 223 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 ENPP5Q9UJA9 477 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 COPS3Q9UNS2 423 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 TMEM14AQ9Y6G1 99 aa8.34□□□□□ -1.07
NUDCD3-210ENST00000493613 MAGEB4O15481 346 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 SYNGR1O43759 233 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 PRKYO43930 277 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 DHRS3O75911 302 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 NRASP01111 189 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 IGLV3-1P01715 115 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 PGA5P0DJD9 388 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 VSIG10L2P0DP72 767 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 CCL3L1P16619 93 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 COX7A1P24310 79 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 PRDX2P32119 198 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 HAAOP46952 286 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 CEBPDP49716 269 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 BMXP51813 675 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 RIDAP52758 137 aaKnown RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 CRISP1P54107 249 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 ERVFRD-1P60508 538 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 ESRRGP62508 458 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 COL7A1Q02388 2944 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 PTGES3Q15185 160 aaKnown RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 LIAT1Q6ZQX7 453 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 BCDIN3DQ7Z5W3 292 aaKnown RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 ZNF573Q86YE8 665 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 BATF2Q8N1L9 274 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 C11orf42Q8N5U0 333 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 DTX3Q8N9I9 347 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 OR4M1Q8NGD0 313 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 OR2T27Q8NH04 317 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 CNN2Q99439 309 aaKnown RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 NKX3-1Q99801 234 aaPredicted RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 GPR173Q9NS66 373 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 USE1Q9NZ43 259 aa8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 NUFIP1Q9UHK0 495 aaKnown RBP8.33□□□□□ -1.08
NUDCD3-210ENST00000493613 A6NIN4 97 aa8.32□□□□□ -1.08
NUDCD3-210ENST00000493613 LOC110117498-PIK3R3F6TDL0 507 aa8.32□□□□□ -1.08
NUDCD3-210ENST00000493613 J3QT63 122 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms