RNA–Protein interactions for RNA: ENST00000493582.5

HDAC4-210, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,188 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-210ENST00000493582 NSG1A0A0A6YYJ2 146 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ATP6V0CP27449 155 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 TAS2R46P59540 309 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 DEFB103AP81534 67 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 GRASPQ7Z6J2 395 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-210ENST00000493582 WDFY1Q8IWB7 410 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 C1orf87Q8N0U7 546 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 OR51T1Q8NGJ9 327 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 VN1R1Q9GZP7 353 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ZBP1Q9H171 429 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 FAM206AQ9NX38 181 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 PCNX3Q9H6A9 2034 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 DHRS7CA6NNS2 312 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 HIDE1A8MVS5 230 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 AHSA1O95433 338 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 PNLIPP16233 465 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 MMP16P51512 607 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 TMEM183AQ8IXX5 376 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 TOMM40LQ969M1 308 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 C5orf34Q96MH7 638 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ADOQ96SZ5 270 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 FBLN5Q9UBX5 448 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 CHD7Q9P2D1 2997 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ARHGEF17Q96PE2 2063 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-210ENST00000493582 DBHP09172 617 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 OR4A8P0C604 315 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 OR5AC1P0C628 307 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ZNF20P17024 532 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ANOS1P23352 680 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 BLVRBP30043 206 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-210ENST00000493582 PIGPP57054 158 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 PPP1CAP62136 330 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 HLA-DRB3P79483 266 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 GPR157Q5UAW9 335 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 LHX8Q68G74 356 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 C1QL2Q7Z5L3 287 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 SPRED2Q7Z698 418 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 OR5AS1Q8N127 324 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 GPR137CQ8N3F9 429 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 OR4X1Q8NH49 305 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 PATE1Q8WXA2 126 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 DGAT2Q96PD7 388 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 CCDC3Q9BQI4 270 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 ACTR3CQ9C0K3 210 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-210ENST00000493582 KIAA1456Q9P272 454 aa10.28□□□□□ -0.76
HDAC4-210ENST00000493582 TRAV36DV7A0A075B6V5 113 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 FAM221AA4D161 298 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 CRYM-AS1A6NIL9 109 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 UTS2O95399 124 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 IL11P20809 199 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 SGCBQ16585 318 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.27□□□□□ -0.77
HDAC4-210ENST00000493582 FBXW12Q6X9E4 464 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 CPEB2Q7Z5Q1 589 aaKnown RBP10.27□□□□□ -0.77
HDAC4-210ENST00000493582 ZNF321PQ8N8H1 164 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 OR10J5Q8NHC4 309 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 NPRL2Q8WTW4 380 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 HAS2Q92819 552 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 SHDQ96IW2 340 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 HDHD3Q9BSH5 251 aaPredicted RBP10.27□□□□□ -0.77
HDAC4-210ENST00000493582 APOOQ9BUR5 198 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 OR10A2Q9H208 303 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 LIME1Q9H400 295 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 IL17BQ9UHF5 180 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 PADI1Q9ULC6 663 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 FAM24AA6NFZ4 105 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 NPSP0C0P6 89 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 SLC37A1P57057 533 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 RPL23AP62750 156 aaKnown RBP10.27□□□□□ -0.77
HDAC4-210ENST00000493582 CST6Q15828 149 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 COL13A1Q5TAT6 717 aaPredicted RBP10.27□□□□□ -0.77
HDAC4-210ENST00000493582 SFTPA2Q8IWL1 248 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 TSACCQ96A04 125 aaPredicted RBP10.27□□□□□ -0.77
HDAC4-210ENST00000493582 ELSPBP1Q96BH3 223 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 SPAG17Q6Q759 2223 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 DOCK8Q8NF50 2099 aa10.27□□□□□ -0.77
HDAC4-210ENST00000493582 A0A1W2PQU0 124 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 PRSS38A1L453 326 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 CDC14CA4D256 554 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 HPNP05981 417 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 MMP9P14780 707 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 PSRC1Q6PGN9 363 aaPredicted RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 SLC35E3Q7Z769 313 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 ARHGEF39Q8N4T4 335 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 RNASEH2CQ8TDP1 164 aaKnown RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 GPR119Q8TDV5 335 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 RCC1LQ96I51 464 aaKnown RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 FAM60AQ9NP50 221 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 MRPS23Q9Y3D9 190 aaKnown RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 B3GALT1Q9Y5Z6 326 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 MYO15AQ9UKN7 3530 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 CNTRLQ7Z7A1 2325 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 A6NNC1 897 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 H0YIG0 161 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 NOVA1P51513 510 aaKnown RBP10.26□□□□□ -0.77
HDAC4-210ENST00000493582 RAB11AP62491 216 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 EWSR1Q01844 656 aaKnown RBP eCLIP10.26□□□□□ -0.774e-6■■■□□ 15
HDAC4-210ENST00000493582 COL10A1Q03692 680 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 GAB4Q2WGN9 574 aa10.26□□□□□ -0.77
HDAC4-210ENST00000493582 KLHL24Q6TFL4 600 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms