RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 ALKBH1Q13686 389 aaKnown RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 TSTQ16762 297 aaKnown RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 HFEQ30201 348 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 TP53I3Q53FA7 332 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 DMKNQ6E0U4 476 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 ZNF529Q6P280 563 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 RPL22L1Q6P5R6 122 aaKnown RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 ZNF771Q7L3S4 317 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 WDR86Q86TI4 376 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 OR5AS1Q8N127 324 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 PARP16Q8N5Y8 322 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 NANOGP1Q8N7R0 232 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 HPSE2Q8WWQ2 592 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 C4orf36Q96KX1 117 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 TBX5Q99593 518 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 PIMREGQ9BSJ6 248 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 FGF23Q9GZV9 251 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 OR51I2Q9H344 312 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 SEBOXQ9HB31 216 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 ACOXLQ9NUZ1 547 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 TMEM160Q9NX00 188 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 PPP1R3CQ9UQK1 317 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 NPTNQ9Y639 398 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.64□□□□□ -1.51
VPS52-219ENST00000493379 RYR2Q92736 4967 aa5.64□□□□□ -1.51
VPS52-219ENST00000493379 PPIAL4EA0A075B759 164 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 PPIAL4CA0A0B4J2A2 164 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 TMEM212A6NML5 194 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 E9PI62 339 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 F5H0A9 414 aaPredicted RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 PPIAL4DF5H284 164 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 J3QLW9 94 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 SLC1A7O00341 560 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 PLPP2O43688 288 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 XPNPEP2O43895 674 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 GPX5O75715 221 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ZFPL1O95159 310 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 NRASP01111 189 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CDK1P06493 297 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 HTR1AP08908 422 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 UBCP0CG48 685 aaKnown RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 PPIAL4FP0DN26 164 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CD37P11049 281 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ZNF19P17023 458 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 MPZP25189 248 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 GPR6P46095 362 aaPredicted RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 CHN2P52757 468 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ZNF154Q13106 437 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 MED21Q13503 144 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 GPR50Q13585 617 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CDK5R1Q15078 307 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 OR8G1Q15617 311 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 MPPED2Q15777 294 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 MLANAQ16655 118 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 TMEM249Q2WGJ8 235 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CLVS2Q5SYC1 327 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 BCL2L15Q5TBC7 163 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ATPAF1Q5TC12 328 aaPredicted RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 TEX36Q5VZQ5 186 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 IZUMO2Q6UXV1 221 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 TMPRSS11AQ6ZMR5 421 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 UTS2BQ765I0 119 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 GCSAMQ8N6F7 178 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 BHLHE23Q8NDY6 225 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 DNAAF1Q8NEP3 725 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 OR1M1Q8NGA1 313 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 OR10Z1Q8NGY1 313 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 PP6455Q8WZ26 134 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CCL17Q92583 94 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 RAB1CQ92928 201 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 RAB24Q969Q5 203 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 TECTBQ96PL2 329 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ZNF184Q99676 751 aaPredicted RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 PPP1R3EQ9H7J1 279 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 TMEM165Q9HC07 324 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ISYNA1Q9NPH2 558 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.63□□□□□ -1.51
VPS52-219ENST00000493379 PAK1IP1Q9NWT1 392 aaPredicted RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 KAAG1Q9UBP8 84 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CLEC2DQ9UHP7 191 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 ENPP5Q9UJA9 477 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 GNG8Q9UK08 70 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 LSM2Q9Y333 95 aaKnown RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 WIPI2Q9Y4P8 454 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 LRRC42Q9Y546 428 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 CACNG2Q9Y698 323 aa5.63□□□□□ -1.51
VPS52-219ENST00000493379 SIRT4Q9Y6E7 314 aaPredicted RBP5.63□□□□□ -1.51
VPS52-219ENST00000493379 YLPM1P49750 1951 aaKnown RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 IGKV1-9A0A0C4DH69 117 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 TRBV5-5A0A0J9YX44 114 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 PQLC2LA1A4F0 135 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 OR5B21A6NL26 309 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ZNF850A8MQ14 1090 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 CLDN25C9JDP6 229 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.62□□□□□ -1.51
VPS52-219ENST00000493379 P2RY10O00398 339 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 WNT9BO14905 357 aa5.62□□□□□ -1.51
VPS52-219ENST00000493379 SYT7O43581 403 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms