RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	YIPF3	Q9GZM5	350 aa		12.54	□□□□□ -0.4
MRPL55-231	ENST00000492170	PPA2	Q9H2U2	334 aa		12.54	□□□□□ -0.4
MRPL55-231	ENST00000492170	OR51I2	Q9H344	312 aa		12.54	□□□□□ -0.4
MRPL55-231	ENST00000492170	ELL3	Q9HB65	397 aa	Predicted RBP	12.54	□□□□□ -0.4
MRPL55-231	ENST00000492170	SF3B6	Q9Y3B4	125 aa	Known RBP	12.54	□□□□□ -0.4
MRPL55-231	ENST00000492170	IGKV1D-17	A0A075B6S4	117 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170		A0A0G2JK05	382 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	TMEM269	A0A1B0GVZ9	245 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	OR5B21	A6NL26	309 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	ANKRD65	E5RJM6	399 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170		H0YAE9	185 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	PSG2	P11465	335 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	CAPZA1	P52907	286 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	LCN1P1	Q5VSP4	162 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	DEGS2	Q6QHC5	323 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	KRT74	Q7RTS7	529 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	FAM185A	Q8N0U4	392 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	ZNRF1	Q8ND25	227 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	OR5A2	Q8NGI9	324 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	OR51G2	Q8NGK0	314 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	SLC29A1	Q99808	456 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	MRO	Q9BYG7	248 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	FAM234A	Q9H0X4	552 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	FAM206A	Q9NX38	181 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	ZNF222	Q9UK12	451 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170	ORC6	Q9Y5N6	252 aa		12.53	□□□□□ -0.4
MRPL55-231	ENST00000492170		H3BUX3	64 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	ANGPTL7	O43827	346 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	GABRA5	P31644	462 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	RIPPLY1	Q0D2K3	151 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	SMIM21	Q3B7S5	101 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF829	Q3KNS6	432 aa	Predicted RBP	12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZBTB37	Q5TC79	503 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	PLCXD3	Q63HM9	321 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	HAGHL	Q6PII5	290 aa	Predicted RBP	12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	MEPCE	Q7L2J0	689 aa	Known RBP	12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	BCDIN3D	Q7Z5W3	292 aa	Known RBP	12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR8J1	Q8NGP2	316 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	FAM110D	Q8TAY7	271 aa	Predicted RBP	12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	EME1	Q96AY2	570 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	SDSL	Q96GA7	329 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	PBOV1	Q9GZY1	135 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170	MAB21L2	Q9Y586	359 aa		12.52	□□□□□ -0.41
MRPL55-231	ENST00000492170		A0A1W2PPH5	198 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	PSMD9	O00233	223 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF254	O75437	659 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	BAG2	O95816	211 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	MRPL3	P09001	348 aa	Known RBP	12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	CSF1	P09603	554 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	HCCS	P53701	268 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	RCN1	Q15293	331 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	SLC35E4	Q6ICL7	350 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZBTB49	Q6ZSB9	765 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	MOB3C	Q70IA8	216 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	GID4	Q8IVV7	300 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR51E1	Q8TCB6	317 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	ASB17	Q8WXJ9	295 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	AQP3	Q92482	292 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	IL4I1	Q96RQ9	567 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	MBOAT4	Q96T53	435 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	SSX3	Q99909	188 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	GPR84	Q9NQS5	396 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	RASL12	Q9NYN1	266 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	FBLN5	Q9UBX5	448 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	ENPP5	Q9UJA9	477 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	PIGL	Q9Y2B2	252 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	TMEM14A	Q9Y6G1	99 aa		12.51	□□□□□ -0.41
MRPL55-231	ENST00000492170	MTRF1	O75570	445 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	FAH	P16930	419 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	RIDA	P52758	137 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	CDC42	P60953	191 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	ROM1	Q03395	351 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	HERPUD1	Q15011	391 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	LRRC75B	Q2VPJ9	315 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF684	Q5T5D7	378 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	HCP5	Q6MZN7	132 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	C11orf88	Q6PI97	169 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	ACP7	Q6ZNF0	438 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170		Q6ZTK2	550 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	ZNF679	Q8IYX0	411 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	POC1A	Q8NBT0	407 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR4C13	Q8NGP0	309 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	TRUB1	Q8WWH5	349 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	RDH12	Q96NR8	316 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	OR8B4	Q96RC9	309 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	ADGRL4	Q9HBW9	690 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	RAB18	Q9NP72	206 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	NUFIP1	Q9UHK0	495 aa	Known RBP	12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	IKZF2	Q9UKS7	526 aa		12.5	□□□□□ -0.41
MRPL55-231	ENST00000492170	hCG_1809904	A0A1W2PP81	198 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170		A0A1W2PPE2	198 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170		A0A1W2PR64	198 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170		A0A1W2PRV1	198 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	RFPL4A	A6NLU0	287 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	RFPL4AL1	F8VTS6	287 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	SLC1A7	O00341	560 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	DLGAP1	O14490	977 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	DHRS3	O75911	302 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	NRAS	P01111	189 aa		12.49	□□□□□ -0.41
MRPL55-231	ENST00000492170	IGLV3-1	P01715	115 aa		12.49	□□□□□ -0.41

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms