RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 AQP3Q92482 292 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 EME1Q96AY2 570 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 Q96MT0 163 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 APOL4Q9BPW4 351 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 TTTY10Q9BZA0 68 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 FAM234AQ9H0X4 552 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 WDR13Q9H1Z4 485 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 NEK6Q9HC98 313 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 COPS3Q9UNS2 423 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 SF3B6Q9Y3B4 125 aaKnown RBP13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 MMP24Q9Y5R2 645 aa13.67□□□□□ -0.22
PDLIM2-217ENST00000491330 CUBNO60494 3623 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 SVEP1Q4LDE5 3571 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 MDFIC2A0A1B0GVS7 189 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 METTL15A6NJ78 407 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 RPP14O95059 124 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 NXPH2O95156 264 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 CYB5AP00167 134 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 POLR2IP36954 125 aaKnown RBP13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 RAG2P55895 527 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 Q6ZSR3 168 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 PDZD9Q8IXQ8 264 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 ZNF561Q8N587 486 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 OR10H4Q8NGA5 316 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 C8orf46Q8TAG6 207 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 HAVCR2Q8TDQ0 301 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 HPSE2Q8WWQ2 592 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 C10orf35Q96D05 121 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 C1orf147Q96MC9 270 aaPredicted RBP13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 PPP1R3EQ9H7J1 279 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 ARHGAP32A7KAX9 2087 aa13.66□□□□□ -0.22
PDLIM2-217ENST00000491330 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 J3QT63 122 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 SYT7O43581 403 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 TTRP02766 147 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 ACSM1Q08AH1 577 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 FAM185AQ8N0U4 392 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 POC1AQ8NBT0 407 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 OR5R1Q8NH85 324 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 SEH1LQ96EE3 360 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 GAFA1Q96PS6 74 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 TBX5Q99593 518 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 ZNF696Q9H7X3 374 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 HEXA-AS1Q9H8Q6 139 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 SIRT7Q9NRC8 400 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 GMPPBQ9Y5P6 360 aa13.65□□□□□ -0.22
PDLIM2-217ENST00000491330 ANKRD61A6NGH8 418 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 NPFFO15130 113 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 SRSF10O75494 262 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 RHBDL1O75783 438 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 NDUFA7O95182 113 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 PSG2P11465 335 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 UBE2E1P51965 193 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 MRPL28Q13084 256 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 BCDIN3DQ7Z5W3 292 aaKnown RBP13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 LDLRAD3Q86YD5 345 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 PACRGLQ8N7B6 248 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 CHIAQ9BZP6 476 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 INPP5EQ9NRR6 644 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 GPR173Q9NS66 373 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 GLS2Q9UI32 602 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 SLC22A13Q9Y226 551 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 V9GYS6 101 aa13.64□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A0U1RQK1 487 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 FAM230AA0A1W2PPH8 454 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 A0A1W2PQL4 384 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 RFPL4AA6NLU0 287 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 RFPL4AL1F8VTS6 287 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 H3BUI4 141 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 M0R129 80 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 SLC16A6O15403 523 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 UBCP0CG48 685 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 CCL1P22362 96 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 OMGP23515 440 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 PRDX2P32119 198 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 IER3P46695 156 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 LGALS4P56470 323 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 ACTA2P62736 377 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 ACTG2P63267 376 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 MFGE8Q08431 387 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 CNN3Q15417 329 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 DGUOKQ16854 277 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 OLFML2AQ68BL7 652 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 ACP7Q6ZNF0 438 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 ZSCAN4Q8NAM6 433 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 ZNRF1Q8ND25 227 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 BORCS8Q96FH0 119 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 SDSLQ96GA7 329 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 PKIBQ9C010 78 aa13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 MRM2Q9UI43 246 aaKnown RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 SOX21Q9Y651 276 aaPredicted RBP13.63□□□□□ -0.23
PDLIM2-217ENST00000491330 LOC100130705A0A1B0GUX0 176 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 MEIOCA2RUB1 952 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 CLPSL1A2RUU4 121 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 NOS1APO75052 506 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 MDKP21741 143 aaPredicted RBP13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 FUT6P51993 359 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 RPL31P62899 125 aaKnown RBP13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 PRR31Q5SQ13 230 aa13.62□□□□□ -0.23
PDLIM2-217ENST00000491330 TMEM244Q5VVB8 128 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 122.1 ms