RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 FAIMQ9NVQ4 179 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TMCC3Q9ULS5 477 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 MGAT4BQ9UQ53 548 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 NOSIPQ9Y314 301 aaKnown RBP2.2□□□□□ -2.06
PHC3-213ENST00000491258 WDR45Q9Y484 360 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 FLVCR1Q9Y5Y0 555 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 POMT1Q9Y6A1 747 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 ANKRD36A6QL64 1941 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 VPS13CQ709C8 3753 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 MED13Q9UHV7 2174 aa2.2□□□□□ -2.06
PHC3-213ENST00000491258 TENM1Q9UKZ4 2725 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CNTRLQ7Z7A1 2325 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 NIPBLQ6KC79 2804 aaeCLIP2.19□□□□□ -2.06
PHC3-213ENST00000491258 DCHS2Q6V1P9 2916 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 IGKV2-28A0A075B6P5 120 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 IGKV2D-24A0A075B6R9 120 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 A0A1W2PRQ8 180 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ERICH4A6NGS2 130 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 E9PBE3 544 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 H7C417 338 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 M0R1B8 84 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 SDHDO14521 159 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CCSO14618 274 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 TM9SF1O15321 606 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 RGS16O15492 202 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 SNNO75324 88 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 AKR7A3O95154 331 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 KRT75O95678 551 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 LGI1O95970 557 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 IGKV2D-28P01615 120 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 IL6P05231 212 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 DBIP07108 87 aaKnown RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 TFPTP0C1Z6 253 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 GKN3PP0CG01 181 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ZCCHC18P0CG32 403 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 RPS2P15880 293 aaKnown RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 SLC25A16P16260 332 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 BGNP21810 368 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 USF1P22415 310 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 GLRA1P23415 457 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CXCR1P25024 350 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CHI3L1P36222 383 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 CDKN2CP42773 168 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 IER3P46695 156 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 FABP6P51161 128 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 POLR2HP52434 150 aaKnown RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 NME5P56597 212 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 PRPS1P60891 318 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 TGFBR3Q03167 851 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 LRRC74AQ0VAA2 488 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 BST1Q10588 318 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 BNIP2Q12982 314 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 GNA13Q14344 377 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 SPHARQ15513 63 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 NRF1Q16656 503 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 MICAQ29983 383 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 TMEM249Q2WGJ8 235 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CHRFAM7AQ494W8 412 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 LIN52Q52LA3 116 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 GPAT3Q53EU6 434 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 HIKESHIQ53FT3 197 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 MRPL2Q5T653 305 aaKnown RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 C9orf135Q5VTT2 229 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ZNF691Q5VV52 312 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 C1orf140Q5VVS0 124 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CYB5R2Q6BCY4 276 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 CASP12Q6UXS9 341 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 AAED1Q7RTV5 226 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 VRK2Q86Y07 508 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ERI1Q8IV48 349 aaKnown RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 AQP12AQ8IXF9 295 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 PEX5LQ8IYB4 626 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 MUC15Q8N387 334 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 C17orf78Q8N4C9 275 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ARL6IP6Q8N6S5 226 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 TRIML2Q8N7C3 387 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 TPRX1Q8N7U7 411 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 OR9K2Q8NGE7 335 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 OR4F5Q8NH21 305 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 OR52P1PQ8NH57 321 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ZNF563Q8TA94 476 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 MAGEE2Q8TD90 523 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 ADAMTS16Q8TE57 1224 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 C10orf105Q8TEF2 133 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 TMEM158Q8WZ71 300 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 BCL2L2Q92843 193 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 DDIT4LQ96D03 193 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 ZHX1-C8orf76Q96EF9 292 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 DNAJA3Q96EY1 480 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 AURKBQ96GD4 344 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 SLC35G5Q96KT7 338 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 OR52E6Q96RD3 313 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 PANX1Q96RD7 426 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 RSPO3Q9BXY4 272 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 WDR55Q9H6Y2 383 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 SLC17A5Q9NRA2 495 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 AIG1Q9NVV5 245 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 SLCO1C1Q9NYB5 712 aa2.19□□□□□ -2.06
PHC3-213ENST00000491258 MARCOQ9UEW3 520 aaPredicted RBP2.19□□□□□ -2.06
PHC3-213ENST00000491258 MLXQ9UH92 298 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms