RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 TAF13Q15543 124 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 TFAP2EQ6VUC0 442 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 MS4A7Q9GZW8 240 aaPredicted RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 RASL12Q9NYN1 266 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 FOXD3Q9UJU5 478 aaPredicted RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 PLEKHA6Q9Y2H5 1048 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 NOSIPQ9Y314 301 aaKnown RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 MYO7BQ6PIF6 2116 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 LOC100509620A0A075B734 347 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 ZNF724A8MTY0 619 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 BCL2L11O43521 198 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 SCGNO76038 276 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 IL2RAP01589 272 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 HLA-GP17693 338 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 QRFPP83859 136 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 PPP1R1AQ13522 171 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 LRRC37A5PQ49AS3 106 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 MCEMP1Q8IX19 187 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 STPG2Q8N412 459 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 GVQW1Q8N7I0 195 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 OR10K1Q8NGX5 313 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 ADAT3Q96EY9 351 aaPredicted RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 GMPPAQ96IJ6 420 aaPredicted RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 VRK1Q99986 396 aaPredicted RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 PBOV1Q9GZY1 135 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 CST11Q9H112 138 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 C12orf49Q9H741 205 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 IFT46Q9NQC8 304 aa19.79■□□□□ 0.76
USF3-203ENST00000491165 RALYQ9UKM9 306 aaKnown RBP19.79■□□□□ 0.76
USF3-203ENST00000491165 SS18L1O75177 396 aaPredicted RBP19.78■□□□□ 0.76
USF3-203ENST00000491165 HIST3H3Q16695 136 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 OR52W1Q6IF63 320 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 AAED1Q7RTV5 226 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 NOXO1Q8NFA2 376 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 MITD1Q8WV92 249 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 NUDCD2Q8WVJ2 157 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 MRGPRFQ96AM1 343 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 TMEM45BQ96B21 275 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 ZNF837Q96EG3 531 aaPredicted RBP19.78■□□□□ 0.76
USF3-203ENST00000491165 SEC22AQ96IW7 307 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 CYB5R1Q9UHQ9 305 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 ZNF726A6NNF4 738 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 C1QL1O75973 258 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 IGHG1P01857 330 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 VSIG8P0DPA2 414 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 KIR2DL2P43627 348 aaPredicted RBP19.78■□□□□ 0.76
USF3-203ENST00000491165 VWA1Q6PCB0 445 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 PPP1R1CQ8WVI7 109 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 MRPS24Q96EL2 167 aaKnown RBP19.78■□□□□ 0.76
USF3-203ENST00000491165 PHB2Q99623 299 aa19.78■□□□□ 0.76
USF3-203ENST00000491165 C9orf170A2RU37 121 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 TRIM77I1YAP6 450 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 GLI4P10075 376 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 RAB3AP20336 220 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 PTGER4P35408 488 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 LUMP51884 338 aaPredicted RBP19.77■□□□□ 0.76
USF3-203ENST00000491165 FAHD2BQ6P2I3 314 aaPredicted RBP19.77■□□□□ 0.76
USF3-203ENST00000491165 OR5D14Q8NGL3 314 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 FAHD2AQ96GK7 314 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 ALKBH3Q96Q83 286 aaPredicted RBP19.77■□□□□ 0.76
USF3-203ENST00000491165 DNTTIP1Q9H147 329 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 WDR13Q9H1Z4 485 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 C12orf4Q9NQ89 552 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 SLC5A6Q9Y289 635 aa19.77■□□□□ 0.76
USF3-203ENST00000491165 MRPL33O75394 65 aaKnown RBP19.76■□□□□ 0.75
USF3-203ENST00000491165 TNFSF13O75888 250 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 HRH1P35367 487 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 GSK3AP49840 483 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 CLRN1P58418 232 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 IL13RA1P78552 427 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 TLE1Q04724 770 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 RBPJQ06330 500 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 IGFBP7Q16270 282 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 SLC22A6Q4U2R8 563 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 FAM74A1Q5RGS3 127 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 TSPO2Q5TGU0 170 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 ACOT7LQ6ZUV0 252 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 FAM214BQ7L5A3 538 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 NUDT16L1Q9BRJ7 211 aaKnown RBP19.76■□□□□ 0.75
USF3-203ENST00000491165 ESPL1Q14674 2120 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 GNB3P16520 340 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 ATP1B3P54709 279 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 MOB3CQ70IA8 216 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 OR13C9Q8NGT0 318 aa19.76■□□□□ 0.75
USF3-203ENST00000491165 RNF222A6NCQ9 220 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 ERCC1P07992 297 aaPredicted RBP19.75■□□□□ 0.75
USF3-203ENST00000491165 TBPP20226 339 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 LAP3P28838 519 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 ZNF273Q14593 569 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 AWAT2Q6E213 333 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 C20orf196Q8IYI0 205 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 CNEP1R1Q8N9A8 125 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 OR10S1Q8NGN2 331 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 TMEM54Q969K7 222 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 PHYHIPLQ96FC7 376 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 ZNF471Q9BX82 626 aaPredicted RBP19.75■□□□□ 0.75
USF3-203ENST00000491165 SLC7A10Q9NS82 523 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 FBLN5Q9UBX5 448 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 PRSS50Q9UI38 385 aa19.75■□□□□ 0.75
USF3-203ENST00000491165 OSGIN2Q9Y236 505 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms