RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 SLCO1A2P46721 670 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 RPS9P46781 194 aaKnown RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR10A3P58181 314 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 LINC00315P59091 139 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 ERVS71-1P61550 626 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 RPL18AQ02543 176 aaKnown RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 CD164Q04900 197 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 AESQ08117 197 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 C2orf54Q08AI8 447 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 SPA17Q15506 151 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 MOGQ16653 247 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM183BQ1AE95 376 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 ACSM3Q53FZ2 586 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 LCN12Q6JVE5 192 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 DNM1P34Q6PK57 102 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 PEX26Q7Z412 305 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 FAM19A1Q7Z5A9 133 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 NT5DC3Q86UY8 548 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 C10orf107Q8IVU9 208 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM183AQ8IXX5 376 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 H1FOOQ8IZA3 346 aaPredicted RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 STPG2Q8N412 459 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 CBR4Q8N4T8 237 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 ARRDC1Q8N5I2 433 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF680Q8NEM1 530 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR6Q1Q8NGQ2 317 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR10Z1Q8NGY1 313 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR2G3Q8NGZ4 309 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 PIGXQ8TBF5 258 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 DTD1Q8TEA8 209 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 SDR42E1Q8WUS8 393 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM230Q96A57 120 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 KCTD7Q96MP8 289 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 RILPQ96NA2 401 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 COL21A1Q96P44 957 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 HBEGFQ99075 208 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 EBNA1BP2Q99848 306 aaKnown RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 GABRG3Q99928 467 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 NUDT9Q9BW91 350 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 METTL9Q9H1A3 318 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 IFI27L2Q9H2X8 130 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 EXOSC4Q9NPD3 245 aaKnown RBP3□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM9BQ9NQ34 198 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 CALYQ9NYX4 217 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 UVRAGQ9P2Y5 699 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 TBX21Q9UL17 535 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR51B2Q9Y5P1 312 aa3□□□□□ -1.93
HMGB1P38-201ENST00000490557 MTCL1Q9Y4B5 1905 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 IGLV4-60A0A075B6I1 120 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 A0A0B4J2A0 478 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC5A10A0PJK1 596 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 NCBP2LA6PVI3 153 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 ERVV-1B6SEH8 477 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 F5H5T6 163 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 XKRYO14609 159 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 BIRC5O15392 142 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SUPT3HO75486 399 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 CIAO1O76071 339 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SRP72O76094 671 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TTC4O95801 387 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 AIFM1O95831 613 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TCRBP04435 133 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 CSF3P09919 207 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 GKN3PP0CG01 181 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 C8orf88P0DMB2 117 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 FOLR1P15328 257 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 DTYMKP23919 212 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 HTR1DP28221 377 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SERPINB5P36952 375 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OMPP47874 163 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 UBE2AP49459 152 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 DLX6P56179 175 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 CLDN12P56749 244 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR12D2P58182 307 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZNF121P58317 390 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 NUTF2P61970 127 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 LSM6P62312 80 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 CCNJQ5T5M9 372 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR2T5Q6IEZ7 315 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SLC30A8Q8IWU4 369 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 FAM71AQ8IYT1 594 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SAXO1Q8IYX7 474 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TBC1D19Q8N5T2 526 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR4K17Q8NGC6 315 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR52E2Q8NGJ4 325 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 OR2T29Q8NH02 315 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SYNPRQ8TBG9 265 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 AP3S1Q92572 193 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 FGF14Q92915 247 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 EXOSC8Q96B26 276 aaKnown RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TESCQ96BS2 214 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 SMIM19Q96E16 107 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 ZMYND19Q96E35 227 aaPredicted RBP2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 CEP19Q96LK0 163 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM56Q96MV1 263 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 RBP7Q96R05 134 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TMEM208Q9BTX3 173 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 BCL2L14Q9BZR8 327 aa2.99□□□□□ -1.93
HMGB1P38-201ENST00000490557 TSGA10Q9BZW7 698 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms