RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 CLUP10909 449 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 RRM2P31350 389 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 GPM6AP51674 278 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 CAPZA1P52907 286 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 HMGA2P52926 109 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 SSX2Q16385 188 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 SMIM21Q3B7S5 101 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 PLA1AQ53H76 456 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 ARSJQ5FYB0 599 aaPredicted RBP6.56□□□□□ -1.36
USP39-216ENST00000490193 ZNF770Q6IQ21 691 aaPredicted RBP6.56□□□□□ -1.36
USP39-216ENST00000490193 LCN8Q6JVE9 175 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 ZNF782Q6ZMW2 699 aaPredicted RBP6.56□□□□□ -1.36
USP39-216ENST00000490193 ACP7Q6ZNF0 438 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 RASSF6Q6ZTQ3 369 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 SHFQ7M4L6 423 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 C16orf82Q7Z2V1 217 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 LINC00471Q8N535 108 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 CD177Q8N6Q3 437 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 POC1AQ8NBT0 407 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 OR5A2Q8NGI9 324 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 OR13D1Q8NGV5 346 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 OR6K6Q8NGW6 343 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 OR6N2Q8NGY6 317 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 OR2T27Q8NH04 317 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 HIST1H2AAQ96QV6 131 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 INTS14Q96SY0 518 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 BTBD10Q9BSF8 475 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 VIPAS39Q9H9C1 493 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 FGFR1OP2Q9NVK5 253 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 DNAJC27Q9NZQ0 273 aa6.56□□□□□ -1.36
USP39-216ENST00000490193 A0A0U1RQV5 110 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 TCRBV4S1A1TA0A5B7 111 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 C3orf84H3BNL1 204 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 KRT36O76013 467 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 CLIC3O95833 236 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 TK1P04183 234 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 ARG1P05089 322 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 H2AFB1P0C5Y9 115 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 H2AFB2P0C5Z0 115 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 PGA5P0DJD9 388 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 ATP6V1B1P15313 513 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 HOXD3P31249 432 aaPredicted RBP6.55□□□□□ -1.36
USP39-216ENST00000490193 PRDX2P32119 198 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 NUDT2P50583 147 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 PSMA6P60900 246 aaKnown RBP6.55□□□□□ -1.36
USP39-216ENST00000490193 MINOS1Q5TGZ0 78 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 CCDC121Q6ZUS5 278 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 CENPVQ7Z7K6 275 aaPredicted RBP6.55□□□□□ -1.36
USP39-216ENST00000490193 EGFL6Q8IUX8 553 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 ERI1Q8IV48 349 aaKnown RBP6.55□□□□□ -1.36
USP39-216ENST00000490193 OR4M1Q8NGD0 313 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 OR4X2Q8NGF9 303 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 OR8B12Q8NGG6 310 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 OR4Q3Q8NH05 313 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 DPF1Q92782 380 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 MYDGFQ969H8 173 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 OR8B4Q96RC9 309 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 NIPAL2Q9H841 368 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 SPAG4Q9NPE6 437 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 IL1RAPQ9NPH3 570 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 BRD7Q9NPI1 651 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 CMC2Q9NRP2 79 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 TBC1D23Q9NUY8 699 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 MINOS1-NBL1R4GNA1 71 aa6.55□□□□□ -1.36
USP39-216ENST00000490193 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 H3BUI4 141 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 J3QT63 122 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 K7N7A8 449 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 GMNNO75496 209 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 IFNGP01579 166 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 IGLV3-1P01715 115 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 FABP3P05413 133 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 LYNP07948 512 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 ZNF728P0DKX0 622 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 IGHV1-8P0DP01 117 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 GSTT1P30711 240 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 OR12D2P58182 307 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 PSME3P61289 254 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 CEP78Q5JTW2 689 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 LCN1P1Q5VSP4 162 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 HAGHLQ6PII5 290 aaPredicted RBP6.54□□□□□ -1.36
USP39-216ENST00000490193 ETV3LQ6ZN32 361 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 TRPM8Q7Z2W7 1104 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.54□□□□□ -1.36
USP39-216ENST00000490193 OR2T33Q8NG76 320 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 OR9Q2Q8NGE9 314 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 OTOSQ8NHW6 89 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 MCUR1Q96AQ8 359 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 AKR1E2Q96JD6 320 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 NRIP2Q9BQI9 281 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 MCRIP2Q9BUT9 160 aaKnown RBP6.54□□□□□ -1.36
USP39-216ENST00000490193 TSSK6Q9BXA6 273 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 C1orf21Q9H246 121 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 LIN7BQ9HAP6 207 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 HES4Q9HCC6 221 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 ZMAT5Q9UDW3 170 aaKnown RBP6.54□□□□□ -1.36
USP39-216ENST00000490193 MAGEL2Q9UJ55 1249 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 LYVE1Q9Y5Y7 322 aa6.54□□□□□ -1.36
USP39-216ENST00000490193 U3KQK5 164 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms