RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, human

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BRD9-208	ENST00000489816	WDR54	Q9H977	334 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF629	Q9UEG4	869 aa	Predicted RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	LSM5	Q9Y4Y9	91 aa	Known RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	DBX1	A6NMT0	343 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	GP1BA	P07359	652 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	PRF1	P14222	555 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	FOXG1	P55316	489 aa	Predicted RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	TAGLN	Q01995	201 aa	Known RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	KCNMB1	Q16558	191 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	GPR137C	Q8N3F9	429 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	P4HTM	Q9NXG6	502 aa		13.69	□□□□□ -0.22
BRD9-208	ENST00000489816	KIAA2026	Q5HYC2	2103 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	ACTL6A	O96019	429 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	CPT2	P23786	658 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	CLDN15	P56746	228 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	IGFBP7	Q16270	282 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	VAX1	Q5SQQ9	334 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	FBXL14	Q8N1E6	418 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	FOXD3	Q9UJU5	478 aa	Predicted RBP	13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF587B	E7ETH6	402 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	MTRF1	O75570	445 aa	Known RBP	13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	NAT2	P11245	290 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	PSG4	Q00888	419 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF92	Q03936	586 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	GUCA2B	Q16661	112 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	IAH1	Q2TAA2	248 aa	Predicted RBP	13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	RHBDD1	Q8TEB9	315 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	SSC4D	Q8WTU2	575 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	SULT4A1	Q9BR01	284 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	AK3	Q9UIJ7	227 aa		13.68	□□□□□ -0.22
BRD9-208	ENST00000489816	ATP6V1G2-DDX39B	F2Z307	99 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	DIRAS3	O95661	229 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	DUSP1	P28562	367 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	THBS4	P35443	961 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF345	Q14585	488 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF169	Q14929	603 aa	Predicted RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	RPL7L1	Q6DKI1	246 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	SLC16A14	Q7RTX9	510 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	BORCS8	Q96FH0	119 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	MARS2	Q96GW9	593 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	PLA2G3	Q9NZ20	509 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	PADI1	Q9ULC6	663 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	OSGIN2	Q9Y236	505 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	IGKV1-12	A0A0C4DH73	117 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF705E	A8MWA4	302 aa	Predicted RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	IGKV1D-12	P01611	117 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	OR5H8	P0DN80	308 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	NME2	P22392	152 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	FPR2	P25090	351 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	ASCL1	P50553	236 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	ZNF273	Q14593	569 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	C3AR1	Q16581	482 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	ACER2	Q5QJU3	275 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	C10orf128	Q5T292	105 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	SKA3	Q8IX90	412 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	BAP18	Q8IXM2	172 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	FAM89B	Q8N5H3	189 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	CMSS1	Q9BQ75	279 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	FBLN5	Q9UBX5	448 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	C14orf166	Q9Y224	244 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	TBP	P20226	339 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	GSK3A	P49840	483 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	TAS2R31	P59538	309 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	FAM27B	Q5VT28	67 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	RPUSD3	Q6P087	351 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	PPP1R32	Q7Z5V6	425 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	SULF2	Q8IWU5	870 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	OR1F12	Q8NHA8	337 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	MRPL24	Q96A35	216 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	TSNAX	Q99598	290 aa	Known RBP	13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	FAM117A	Q9C073	453 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	SLC6A15	Q9H2J7	730 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	TCFL5	Q9UL49	500 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816		V9GYS6	101 aa		13.67	□□□□□ -0.22
BRD9-208	ENST00000489816	IGHV3-64D	A0A0J9YX35	117 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816		A0A1B0GV50	99 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	FAM166B	A8MTA8	275 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	XRCC2	O43543	280 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	VAMP5	O95183	116 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	HLA-G	P17693	338 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	RAC3	P60763	192 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	ZFP36L1	Q07352	338 aa	Known RBP	13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	OR11L1	Q8NGX0	322 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	FOXB1	Q99853	325 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	TREM1	Q9NP99	234 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816		A0A0U1RQV5	110 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	LOC102725191	A0A1B0GVB3	256 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	FIGNL2	A6NMB9	653 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	ABCD4	O14678	606 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	RBMX	P38159	391 aa	Known RBP	13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	NPBWR2	P48146	333 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	FAHD2B	Q6P2I3	314 aa	Predicted RBP	13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	LINC00696	Q6ZRV3	163 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	GGN	Q86UU5	652 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	OR5T2	Q8NGG2	359 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	OR5L1	Q8NGL2	311 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	PP6455	Q8WZ26	134 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	MARC2	Q969Z3	335 aa		13.66	□□□□□ -0.22
BRD9-208	ENST00000489816	FAHD2A	Q96GK7	314 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms