RNA–Protein interactions for RNA: ENST00000489357.5

VTI1A-207, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 3

Gene VTI1A, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-207ENST00000489357 SHPKQ9UHJ6 478 aa7.36□□□□□ -1.23
VTI1A-207ENST00000489357 PIGLQ9Y2B2 252 aa7.36□□□□□ -1.23
VTI1A-207ENST00000489357 NOSIPQ9Y314 301 aaKnown RBP7.36□□□□□ -1.23
VTI1A-207ENST00000489357 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF587BE7ETH6 402 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 G3V3Q6 166 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 CRTAPO75718 401 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 DUS4LO95620 317 aaKnown RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 MPIG6BO95866 241 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 SP1P08047 785 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 SLC2A1P11166 492 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 FCGR2AP12318 317 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 RPA2P15927 270 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 MGMTP16455 207 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF32P17041 273 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ITGA3P26006 1051 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ARR3P36575 388 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 OR3A4PP47883 348 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 RBP2P50120 134 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TSPAN5P62079 268 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 CEACAM16Q2WEN9 425 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 LGALSLQ3ZCW2 172 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ATPAF1Q5TC12 328 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 OR10K2Q6IF99 312 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 CDPF1Q6NVV7 123 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM65Q6PI78 240 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 PLXDC2Q6UX71 529 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 COLCA1Q6ZS62 124 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 LYG2Q86SG7 212 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 HOGA1Q86XE5 327 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 MUC20Q8N307 709 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 LRRC18Q8N456 261 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 FTMTQ8N4E7 242 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 C12orf45Q8N5I9 185 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ZSCAN4Q8NAM6 433 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM178AQ8NBL3 297 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM185AQ8NFB2 350 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 PXT1Q8NFP0 134 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 OR11H4Q8NGC9 324 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 OR13C8Q8NGS7 320 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 OR8S1Q8NH09 359 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TERB2Q8NHR7 220 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 SGK3Q96BR1 496 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 REEP6Q96HR9 211 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 PHB2Q99623 299 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 SLC6A7Q99884 636 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 DHRS9Q9BPW9 319 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 C1QTNF5Q9BXJ0 243 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TTTY12Q9BZ98 90 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 SELENOIQ9C0D9 397 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 TINAGL1Q9GZM7 467 aaPredicted RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 CHST6Q9GZX3 395 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 METTL9Q9H1A3 318 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 KCNK15Q9H427 330 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 POFUT1Q9H488 388 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 GLRX2Q9NS18 164 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 EIF3KQ9UBQ5 218 aaKnown RBP7.35□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF175Q9Y473 711 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 MAB21L2Q9Y586 359 aa7.35□□□□□ -1.23
VTI1A-207ENST00000489357 DNAJC13O75165 2243 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF816-ZNF321PA0A0X1KG74 233 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 hCG_38984A0A1B0GV85 526 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 PINLYPA6NC86 204 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A10PA6NDY2 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A18PA6NE21 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A16PA6NEW6 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 WIPF3A6NGB9 483 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A20PA6NIJ5 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A8PA6NJQ4 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A7PA6NKC0 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A22PA8MWA6 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A12PA8MX19 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A5PA8MXJ8 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A23PA8MXZ1 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 B8ZZF3 427 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SLC22A5O76082 557 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 MMP7P09237 267 aaPredicted RBP7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A15PP0C7V4 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A13PP0C7W8 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A14PP0C7W9 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FAM90A24PP0C7X0 464 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 DTYMKP23919 212 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 HTR5AP47898 357 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF81P51508 661 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 FUT6P51993 359 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SEC61A1P61619 476 aaKnown RBP7.34□□□□□ -1.23
VTI1A-207ENST00000489357 CYCSP99999 105 aaKnown RBP7.34□□□□□ -1.23
VTI1A-207ENST00000489357 PSG4Q00888 419 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 DHRS2Q13268 280 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 ZNF345Q14585 488 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 UBE2V2Q15819 145 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 GRK1Q15835 563 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 TMEM128Q5BJH2 165 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 CLLU1Q5K131 121 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SPINK14Q6IE38 97 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 C11orf88Q6PI97 169 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 BEND4Q6ZU67 534 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 PEG10Q86TG7 708 aaKnown RBP7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SAXO1Q8IYX7 474 aa7.34□□□□□ -1.23
VTI1A-207ENST00000489357 SLC7A5P1Q8MH63 180 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms