RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SPSB4Q96A44 273 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 KCTD12Q96CX2 325 aaKnown RBP8.91□□□□□ -0.98
HDAC6-233ENST00000489352 OR5B12Q96R08 314 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 OR14J1Q9UGF5 321 aa8.91□□□□□ -0.98
HDAC6-233ENST00000489352 hADV38S2A0JD32 116 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 MAGEA13PA6NCF6 341 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 SDHDO14521 159 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 TOR1AO14656 332 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 CNIH1O95406 144 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 SHBGP04278 402 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 GPX2P18283 190 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 KIR3DL2P43630 455 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 BDH1Q02338 343 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 MFGE8Q08431 387 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-233ENST00000489352 HNF4GQ14541 408 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 OR52W1Q6IF63 320 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 RTN4RL2Q86UN3 420 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 THNSL2Q86YJ6 484 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 NRMQ8IXM6 262 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 OR9I1Q8NGQ6 314 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 EPS8L3Q8TE67 593 aaKnown RBP8.9□□□□□ -0.98
HDAC6-233ENST00000489352 ARPC1AQ92747 370 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 RNF166Q96A37 237 aaPredicted RBP8.9□□□□□ -0.98
HDAC6-233ENST00000489352 FAM46AQ96IP4 442 aaKnown RBP8.9□□□□□ -0.98
HDAC6-233ENST00000489352 NRIP2Q9BQI9 281 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 RSRP1Q9BUV0 290 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 ELOVL1Q9BW60 279 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 OR51J1Q9H342 316 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 B9D1Q9UPM9 204 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 VSIG4Q9Y279 399 aa8.9□□□□□ -0.98
HDAC6-233ENST00000489352 DMBT1Q9UGM3 2413 aaPredicted RBP8.9□□□□□ -0.99
HDAC6-233ENST00000489352 VPS13DQ5THJ4 4388 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 TLDC2A0PJX2 215 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 LINC01548A6NM66 108 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 TRPC5OSA6NMA1 111 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 RENP00797 406 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 DCTDP32321 178 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 ESRRGP62508 458 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 MEF2CQ06413 473 aaPredicted RBP8.89□□□□□ -0.99
HDAC6-233ENST00000489352 RBM39Q14498 530 aaKnown RBP8.89□□□□□ -0.99
HDAC6-233ENST00000489352 FAM76BQ5HYJ3 339 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 SMARCD3Q6STE5 483 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 PTCHD4Q6ZW05 846 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 RRM2BQ7LG56 351 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 CATSPERDQ86XM0 798 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 UBE2E2Q96LR5 201 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 CENPMQ9NSP4 180 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 PNPOQ9NVS9 261 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 SIGLEC8Q9NYZ4 499 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 VAPAQ9P0L0 249 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 IER3IP1Q9Y5U9 82 aa8.89□□□□□ -0.99
HDAC6-233ENST00000489352 NCBP2LA6PVI3 153 aaKnown RBP8.88□□□□□ -0.99
HDAC6-233ENST00000489352 OOSP1A8MZH6 123 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 I3L521 148 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 DCTN6O00399 190 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 NDUFB2O95178 105 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 IGHG4P01861 327 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 HOXB9P17482 250 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-233ENST00000489352 TNFRSF1BP20333 461 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 ANOS1P23352 680 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 NOS3P29474 1203 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 OTX1P32242 354 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-233ENST00000489352 CDKN2AP42771 156 aaKnown RBP8.88□□□□□ -0.99
HDAC6-233ENST00000489352 RPS6KA3P51812 740 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 PRRX1P54821 245 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 SLURP1P55000 103 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 PRKCDQ05655 676 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 FHL1Q13642 323 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 TPTE2P1Q5T6R2 138 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 ASPHD1Q5U4P2 390 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 TRAPPC6BQ86SZ2 158 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 HAPLN4Q86UW8 402 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 MSRB3Q8IXL7 192 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 ZDHHC23Q8IYP9 409 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 UBLCP1Q8WVY7 318 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-233ENST00000489352 SGK3Q96BR1 496 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 TAMM41Q96BW9 452 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 PKNOX2Q96KN3 472 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 KCNJ15Q99712 375 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 C20orf27Q9GZN8 174 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 GNB4Q9HAV0 340 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 SDR39U1Q9NRG7 319 aaPredicted RBP8.88□□□□□ -0.99
HDAC6-233ENST00000489352 PCDHB16Q9NRJ7 776 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 BAG5Q9UL15 447 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 STUB1Q9UNE7 303 aa8.88□□□□□ -0.99
HDAC6-233ENST00000489352 hCG_38984A0A1B0GV85 526 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 ZNF732B4DXR9 585 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 LINC01619G3V211 115 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 BUB1B-PAK6H3BSN5 160 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 K7N7A8 449 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 UBDO15205 165 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 NXPH2O95156 264 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 RHCEP18577 417 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 HSD11B1P28845 292 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 GPR4P46093 362 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 GNB1P62873 340 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 GNG3P63215 75 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 RUNX1Q01196 453 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 EDDM3AQ14507 147 aa8.87□□□□□ -0.99
HDAC6-233ENST00000489352 ZDHHC21Q8IVQ6 265 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms