RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 TMEM30CPA0ZSE6 113 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 CNN1P51911 297 aaKnown RBP15.7■□□□□ 0.1
NPHP4-209ENST00000489180 CD300LDQ6UXZ3 194 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 ZNF547Q8IVP9 402 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 LINC00052Q96N35 136 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 WSB1Q9Y6I7 421 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 DHRS3O75911 302 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 PATE4P0C8F1 98 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 FGF8P55075 233 aaPredicted RBP15.7■□□□□ 0.1
NPHP4-209ENST00000489180 ACSM6Q6P461 480 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 TDHQ8IZJ6 230 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 OR2Z1Q8NG97 314 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 OR10AD1Q8NGE0 317 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 SPSB1Q96BD6 273 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 HPP00738 406 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 CTLA4P16410 223 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 C11orf42Q8N5U0 333 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 RFESDQ8TAC1 157 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 RSRP1Q9BUV0 290 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 ZNF391Q9UJN7 358 aa15.7■□□□□ 0.1
NPHP4-209ENST00000489180 OR5AC1P0C628 307 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 GALR1P47211 349 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 RPS4XP62701 263 aaKnown RBP15.69■□□□□ 0.1
NPHP4-209ENST00000489180 STUMQ69YW2 141 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 TOMM20LQ6UXN7 152 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 SERTM1A2A2V5 107 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 PTTG1IPP53801 180 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 TIAL1Q01085 375 aaKnown RBP eCLIP15.69■□□□□ 0.1
NPHP4-209ENST00000489180 HLA-BQ31612 363 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 WDR34Q96EX3 536 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 NDFIP1Q9BT67 221 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 PRO1933Q9H354 126 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 CISD3P0C7P0 127 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 OR1C1Q15619 314 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 MRM1Q6IN84 353 aaKnown RBP15.69■□□□□ 0.1
NPHP4-209ENST00000489180 C17orf78Q8N4C9 275 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 KISS1RQ969F8 398 aaPredicted RBP15.69■□□□□ 0.1
NPHP4-209ENST00000489180 ZNF275Q9NSD4 429 aaPredicted RBP15.69■□□□□ 0.1
NPHP4-209ENST00000489180 FFAR1O14842 300 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 ADAP1O75689 374 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 SPP1P10451 314 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 RNF165Q6ZSG1 346 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 SFTPA1Q8IWL2 248 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 GPR137Q96N19 417 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 MRM2Q9UI43 246 aaKnown RBP15.69■□□□□ 0.1
NPHP4-209ENST00000489180 CXCL3P19876 107 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 LPAR6P43657 344 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 FZD5Q13467 585 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 OR11G2Q8NGC1 345 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 RASL12Q9NYN1 266 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 MTCH2Q9Y6C9 303 aa15.69■□□□□ 0.1
NPHP4-209ENST00000489180 TRGV10A0A0A0MS01 117 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 IGHV3-43A0A0B4J1X8 118 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 CBY3A6NI87 242 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 DUS4LO95620 317 aaKnown RBP15.68■□□□□ 0.1
NPHP4-209ENST00000489180 NGFP01138 241 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 IGHV3-43DP0DP04 118 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 GPR3P46089 330 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 SLC38A11Q08AI6 406 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 GUSBP11Q6P575 273 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 DGAT2L6Q6ZPD8 337 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 VN1R4Q7Z5H5 301 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 UQCC1Q9NVA1 299 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 TCRBV16S1A1N1A0A5B0 115 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 FCGR3BO75015 233 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 CALCRP30988 508 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 SMAD4Q13485 552 aaKnown RBP15.68■□□□□ 0.1
NPHP4-209ENST00000489180 OR4D9Q8NGE8 314 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 POM121L2Q96KW2 1035 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 FBXL17Q9UF56 701 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 TMED3Q9Y3Q3 217 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 LOC102723971A0A1B0GUV8 181 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 PLPP3O14495 311 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 ZNF32P17041 273 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 FAM3AP98173 230 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 ANKRD37Q7Z713 158 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 C10orf111Q8N326 155 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 IFT22Q9H7X7 185 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 VAMP8Q9BV40 100 aa15.68■□□□□ 0.1
NPHP4-209ENST00000489180 MOB3BQ86TA1 216 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 OR2A2Q6IF42 318 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 MIXL1Q9H2W2 232 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 NAA60Q9H7X0 242 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 PSG11Q9UQ72 335 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 LSM2Q9Y333 95 aaKnown RBP15.67■□□□□ 0.1
NPHP4-209ENST00000489180 ADAMTSL3P82987 1691 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 TCAPO15273 167 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 GYPAP02724 150 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 CD200P41217 278 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 GNG3P63215 75 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 OR10AC1Q8NH08 325 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 IP6K3Q96PC2 410 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 GOLT1BQ9Y3E0 138 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 XKRY2A2RUG3 117 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 HSBP1O75506 76 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 RAG2P55895 527 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 Q7L0L9 218 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 BCORQ6W2J9 1755 aa15.67■□□□□ 0.1
NPHP4-209ENST00000489180 IGHV3-13P01766 116 aa15.66■□□□□ 0.1
NPHP4-209ENST00000489180 IGHV3-7P01780 117 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms