RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MAB21L2Q9Y586 359 aa20.57■□□□□ 0.88
HMGN1-217ENST00000489072 SYT7O43581 403 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 PGA5P0DJD9 388 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 GABRB1P18505 474 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 MEDAGQ5VYS4 303 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 PDZD9Q8IXQ8 264 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 KIR3DL3Q8N743 410 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 Q8N7P7 452 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 ZNRF1Q8ND25 227 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 TAF15Q92804 592 aaKnown RBP eCLIP20.56■□□□□ 0.88
HMGN1-217ENST00000489072 ZDHHC16Q969W1 377 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 DMRTB1Q96MA1 342 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 C9orf16Q9BUW7 83 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 ELL3Q9HB65 397 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-217ENST00000489072 RASL12Q9NYN1 266 aa20.56■□□□□ 0.88
HMGN1-217ENST00000489072 ANKRD61A6NGH8 418 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 NDUFB7P17568 137 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 CAV3P56539 151 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 FAM220AQ7Z4H9 259 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 CALHM1Q8IU99 346 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 PQLC1Q8N2U9 271 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 C3orf56Q8N813 242 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 SDSLQ96GA7 329 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 GMPPBQ9Y5P6 360 aa20.55■□□□□ 0.88
HMGN1-217ENST00000489072 LOC107986453A0A1B0GWG9 222 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 NOS1APO75052 506 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-217ENST00000489072 MPZP25189 248 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 DLX1P56177 255 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 ACTC1P68032 377 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 ACTA1P68133 377 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 PRB3Q04118 309 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-217ENST00000489072 UBE2V2Q15819 145 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 Q6YL49 198 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 ANGPTL5Q86XS5 388 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 ENTHD1Q8IYW4 607 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 RDH10Q8IZV5 341 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 BATF2Q8N1L9 274 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 CD177Q8N6Q3 437 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 TRMT10AQ8TBZ6 339 aaKnown RBP20.54■□□□□ 0.88
HMGN1-217ENST00000489072 NPRL2Q8WTW4 380 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 NRIP2Q9BQI9 281 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 PLEKHA1Q9HB21 404 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 NOX4Q9NPH5 578 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 SIRT7Q9NRC8 400 aa20.54■□□□□ 0.88
HMGN1-217ENST00000489072 DAPL1A0PJW8 107 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 RFPL4AA6NLU0 287 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 RFPL4AL1F8VTS6 287 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 MELTFP08582 738 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 OR12D2P58182 307 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 SMIM21Q3B7S5 101 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 ZBTB49Q6ZSB9 765 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 CMTM4Q8IZR5 234 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 PIP4P2Q8N4L2 257 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 TMEM185AQ8NFB2 350 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 OR2G2Q8NGZ5 317 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 LGALS12Q96DT0 336 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 EXOGQ9Y2C4 368 aaKnown RBP20.53■□□□□ 0.88
HMGN1-217ENST00000489072 POLDIP2Q9Y2S7 368 aa20.53■□□□□ 0.88
HMGN1-217ENST00000489072 IGKV1-27A0A075B6S5 117 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 A0A0U1RQK1 487 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 FAM230AA0A1W2PPH8 454 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 SLC16A6O15403 523 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 UBCP0CG48 685 aaKnown RBP20.52■□□□□ 0.88
HMGN1-217ENST00000489072 CEBPDP49716 269 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-217ENST00000489072 NANOS3P60323 173 aaKnown RBP20.52■□□□□ 0.88
HMGN1-217ENST00000489072 ZNF91Q05481 1191 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 FOXL1Q12952 345 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 C16orf87Q6PH81 154 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 CCDC54Q8NEL0 328 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 ADI1Q9BV57 179 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 CHST5Q9GZS9 411 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 HES4Q9HCC6 221 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 TNFRSF19Q9NS68 423 aa20.52■□□□□ 0.88
HMGN1-217ENST00000489072 RNASEK-C17orf49H0YIS7 233 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 NXPH2O95156 264 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 ERVK11-1P61568 191 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 FDX2Q6P4F2 183 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 METAP1DQ6UB28 335 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-217ENST00000489072 KCTD20Q7Z5Y7 419 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 ACBD7Q8N6N7 88 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 RHOXF1Q8NHV9 184 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 TNFRSF14Q92956 283 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 PKIBQ9C010 78 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 FRRS1LQ9P0K9 344 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 SLC7A11Q9UPY5 501 aa20.51■□□□□ 0.87
HMGN1-217ENST00000489072 A0A1W2PQ09 198 aa20.5■□□□□ 0.87
HMGN1-217ENST00000489072 DBTP11182 482 aaKnown RBP20.5■□□□□ 0.87
HMGN1-217ENST00000489072 PRDX2P32119 198 aa20.5■□□□□ 0.87
HMGN1-217ENST00000489072 IL24Q13007 206 aa20.5■□□□□ 0.87
HMGN1-217ENST00000489072 KLRD1Q13241 179 aa20.5■□□□□ 0.87
HMGN1-217ENST00000489072 ADAT3Q96EY9 351 aaPredicted RBP20.5■□□□□ 0.87
HMGN1-217ENST00000489072 FAM118AQ9NWS6 357 aa20.5■□□□□ 0.87
HMGN1-217ENST00000489072 PCDHGB1Q9Y5G3 927 aa20.5■□□□□ 0.87
HMGN1-217ENST00000489072 LOC100130705A0A1B0GUX0 176 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 SNTNA6NMZ2 147 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 GATBO75879 557 aaKnown RBP20.49■□□□□ 0.87
HMGN1-217ENST00000489072 CAPZA1P52907 286 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 C1orf122Q6ZSJ8 110 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 PELI1Q96FA3 418 aa20.49■□□□□ 0.87
HMGN1-217ENST00000489072 CHIAQ9BZP6 476 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms