RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 HACD4Q5VWC8 232 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 LEMD1Q68G75 181 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZNF530Q6P9A1 599 aaPredicted RBP2.55□□□□□ -2
PRPF4-203ENST00000488937 FAM183BPQ6ZVS7 135 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 FAM220AQ7Z4H9 259 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 S100A7AQ86SG5 101 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 NIT1Q86X76 327 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 LGI3Q8N145 548 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 TBC1D19Q8N5T2 526 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 NAV1Q8NEY1 1877 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 OR2D3Q8NGH3 330 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 OR1N2Q8NGR9 330 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 OR2G3Q8NGZ4 309 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 NEK7Q8TDX7 302 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SRSF12Q8WXF0 261 aaKnown RBP2.55□□□□□ -2
PRPF4-203ENST00000488937 FAM3DQ96BQ1 224 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZNF501Q96CX3 271 aaPredicted RBP2.55□□□□□ -2
PRPF4-203ENST00000488937 SLC45A3Q96JT2 553 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 PGLYRP3Q96LB9 341 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZNF597Q96LX8 424 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 RILPQ96NA2 401 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZIM3Q96PE6 472 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SYT15Q9BQS2 421 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 CHCHD5Q9BSY4 110 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 NUDT9Q9BW91 350 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 SLC25A39Q9BZJ4 359 aaPredicted RBP2.55□□□□□ -2
PRPF4-203ENST00000488937 ULBP1Q9BZM6 244 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 THSD7BQ9C0I4 1608 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZDHHC11Q9H8X9 412 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 PANK3Q9H999 370 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 XPNPEP1Q9NQW7 623 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 FAM206AQ9NX38 181 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 DHRS4-AS1Q9P1J3 65 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ZNF608Q9ULD9 1512 aaPredicted RBP2.55□□□□□ -2
PRPF4-203ENST00000488937 PSG11Q9UQ72 335 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 ALG5Q9Y673 324 aa2.55□□□□□ -2
PRPF4-203ENST00000488937 KMT2EQ8IZD2 1858 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 A0A0J9YXV3 536 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CENPVL3A0A0U1RRI6 287 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 A0A1B0GXF2 115 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 DAPL1A0PJW8 107 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 EFCAB9A8MZ26 197 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 RAD1O60671 282 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 GATBO75879 557 aaKnown RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 DUS4LO95620 317 aaKnown RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 HAND1O96004 215 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CD5P06127 495 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 IGKV5-2P06315 115 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CST2P09228 141 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 UCHL3P15374 230 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CD1EP15812 388 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CD36P16671 472 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 RAB3BP20337 219 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 WARSP23381 471 aaKnown RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 RPL12P30050 165 aaKnown RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 MTPNP58546 118 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 TAS2R19P59542 299 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CD300CQ08708 224 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 INCA1Q0VD86 236 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 RGNQ15493 299 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 SLC9A3R2Q15599 337 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 HIST3H3Q16695 136 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 YIF1BQ5BJH7 314 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 TTC32Q5I0X7 151 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 AVPI1Q5T686 147 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 KDM4DQ6B0I6 523 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 LCN12Q6JVE5 192 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 DHRS4L2Q6PKH6 230 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 FAM131AQ6UXB0 335 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 C2orf66Q6UXQ4 117 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 FAM92BQ6ZTR7 304 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 LINC00173Q6ZV60 143 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 FAM231DQ6ZW35 169 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 ZNF589Q86UQ0 364 aaPredicted RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 MYPOPQ86VE0 399 aaPredicted RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 LRRC25Q8N386 305 aaPredicted RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 NEIL3Q8TAT5 605 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 FAM172AQ8WUF8 416 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 PPCDCQ96CD2 204 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 HAUS1Q96CS2 278 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 SMIM12Q96EX1 92 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 MAGEB18Q96M61 343 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 F2RL3Q96RI0 385 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 PITX2Q99697 317 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 ARHGDIGQ99819 225 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 TMED9Q9BVK6 235 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 GABARAPL3Q9BY60 117 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 Q9H3A6 140 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 POMKQ9H5K3 350 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 ASB7Q9H672 318 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 FGF22Q9HCT0 170 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 EXOSC4Q9NPD3 245 aaKnown RBP2.54□□□□□ -2
PRPF4-203ENST00000488937 CCL28Q9NRJ3 127 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 C19orf12Q9NSK7 152 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 ZNF226Q9NYT6 803 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 DNAJC27Q9NZQ0 273 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 CACNG5Q9UF02 275 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 TP53TG5Q9Y2B4 290 aa2.54□□□□□ -2
PRPF4-203ENST00000488937 ARL2BPQ9Y2Y0 163 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms