RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 PLEKHG7Q6ZR37 379 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 Q6ZSR3 168 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 FGFRL1Q8N441 504 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 POC1AQ8NBT0 407 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 ZNF555Q8NEP9 628 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 OR10H4Q8NGA5 316 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 OR14K1Q8NGZ2 314 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 TBC1D15Q8TC07 691 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 NPRL2Q8WTW4 380 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 SSMEM1Q8WWF3 244 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 TRUB1Q8WWH5 349 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 PPP1R14AQ96A00 147 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 ZNF747Q9BV97 191 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 PCDHGB1Q9Y5G3 927 aa11.38□□□□□ -0.59
SPTLC1-207ENST00000488921 TRBV23-1A0A0A0MS06 115 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 A0A1W2PQ09 198 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 A0A1W2PQL4 384 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 METTL15A6NJ78 407 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 POM121CA8CG34 1229 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 M0R1W7 72 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 MAGEB4O15481 346 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 CRYBA1P05813 215 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 MELTFP08582 738 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 PSG2P11465 335 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 SELLP14151 372 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 CCL1P22362 96 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 EEF1B2P24534 225 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 POLR2IP36954 125 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 VHLP40337 213 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 HAAOP46952 286 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 BLMHQ13867 455 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 DGUOKQ16854 277 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 SSX6Q7RTT6 188 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 CATSPERDQ86XM0 798 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 TMEM185AQ8NFB2 350 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 ADI1Q9BV57 179 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 UNKLQ9H9P5 680 aaKnown RBP11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 GPR173Q9NS66 373 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 SMPD3Q9NY59 655 aaPredicted RBP11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 SLC22A13Q9Y226 551 aa11.37□□□□□ -0.59
SPTLC1-207ENST00000488921 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 A0A1B0GTI1 187 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 A0A1B0GUS0 222 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 ANKRD61A6NGH8 418 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 SNTNA6NMZ2 147 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 H0YJX3 145 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 SLC1A7O00341 560 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 SYT7O43581 403 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 GATBO75879 557 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 FBP1P09467 338 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 UBCP0CG48 685 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 PGA5P0DJD9 388 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 ACTC1P68032 377 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 ACTA1P68133 377 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 ZIK1Q3SY52 487 aaPredicted RBP11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 DMRTC1Q5HYR2 192 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 MEDAGQ5VYS4 303 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 NCR3LG1Q68D85 454 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 ACP7Q6ZNF0 438 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 C1orf122Q6ZSJ8 110 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 LDLRAD3Q86YD5 345 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 NRG4Q8WWG1 115 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 SDSLQ96GA7 329 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 HRASLS5Q96KN8 279 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 METTL8Q9H825 291 aaKnown RBP11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 SIRT7Q9NRC8 400 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 ZNF222Q9UK12 451 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 SLC7A11Q9UPY5 501 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 FAM96BQ9Y3D0 163 aa11.36□□□□□ -0.59
SPTLC1-207ENST00000488921 A0A0U1RQK1 487 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 A0A1W2PPH5 198 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 PQLC2LA1A4F0 135 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 FAM181BA6NEQ2 426 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 NOS1APO75052 506 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 NXPH2O95156 264 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 APOL3O95236 402 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 MPZP25189 248 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 HSPA13P48723 471 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 CAPZA1P52907 286 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 TTC23Q5W5X9 447 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 FIP1L1Q6UN15 594 aaKnown RBP11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 PDZD9Q8IXQ8 264 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 ZNF561Q8N587 486 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 DHRSXQ8N5I4 330 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 ZNRF1Q8ND25 227 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 OR4F5Q8NH21 305 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 DYRK2Q92630 601 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 RORBQ92753 470 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 C10orf35Q96D05 121 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 MYCBPQ99417 103 aaPredicted RBP11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 CHIAQ9BZP6 476 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 PKIBQ9C010 78 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 DPAGT1Q9H3H5 408 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 TNFRSF19Q9NS68 423 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 GNG8Q9UK08 70 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 MMP24Q9Y5R2 645 aa11.35□□□□□ -0.59
SPTLC1-207ENST00000488921 BTBD17A6NE02 478 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 SYNGR1O43759 233 aa11.34□□□□□ -0.59
SPTLC1-207ENST00000488921 SERPINA3P01011 423 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms