RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 CD177Q8N6Q3 437 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 C11orf44Q8N8P7 122 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 CANT1Q8WVQ1 401 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 ZNF488Q96MN9 340 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 TEX12Q9BXU0 123 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 TTTY10Q9BZA0 68 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 USE1Q9NZ43 259 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 NUFIP1Q9UHK0 495 aaKnown RBP14.96□□□□□ -0.01
HDAC6-231ENST00000488905 ENPP5Q9UJA9 477 aa14.96□□□□□ -0.01
HDAC6-231ENST00000488905 CCDC182A6NF36 153 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 J3QT63 122 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 GSC2O15499 205 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 CHST1O43916 411 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 DHRS3O75911 302 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 CEBPDP49716 269 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-231ENST00000488905 ROM1Q03395 351 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 MFGE8Q08431 387 aaPredicted RBP14.95□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF684Q5T5D7 378 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 LCN1P1Q5VSP4 162 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 TMEM236Q5W0B7 351 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF679Q8IYX0 411 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 OR8B4Q96RC9 309 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 TEAD3Q99594 435 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 NPFFR1Q9GZQ6 430 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 HEXA-AS1Q9H8Q6 139 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 COPS3Q9UNS2 423 aa14.95□□□□□ -0.02
HDAC6-231ENST00000488905 MEGF11A6BM72 1044 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 AQP12BA6NM10 295 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 SYNGR1O43759 233 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF254O75437 659 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 NRASP01111 189 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 ANXA8P13928 327 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 COX7A1P24310 79 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 HAAOP46952 286 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 RIDAP52758 137 aaKnown RBP14.94□□□□□ -0.02
HDAC6-231ENST00000488905 KPRPQ5T749 579 aaPredicted RBP14.94□□□□□ -0.02
HDAC6-231ENST00000488905 SAMD5Q5TGI4 173 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 TMEM200BQ69YZ2 307 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 AQP12AQ8IXF9 295 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 C11orf42Q8N5U0 333 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 ASB17Q8WXJ9 295 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 MOB1AQ9H8S9 216 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 IKZF2Q9UKS7 526 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 POLDIP2Q9Y2S7 368 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 TMEM14AQ9Y6G1 99 aa14.94□□□□□ -0.02
HDAC6-231ENST00000488905 hCG_1809904A0A1W2PP81 198 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 A0A1W2PPE2 198 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 A0A1W2PR64 198 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 A0A1W2PRV1 198 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 NOS1APO75052 506 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-231ENST00000488905 TTRP02766 147 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 T-ENOLP0DO92 83 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 CCL3L1P16619 93 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 HOXB6P17509 224 aaKnown RBP14.93□□□□□ -0.02
HDAC6-231ENST00000488905 PRKACGP22612 351 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 PRDX2P32119 198 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 LGALS4P56470 323 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 ERVFRD-1P60508 538 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF273Q14593 569 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 SNAPC1Q16533 368 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF782Q6ZMW2 699 aaPredicted RBP14.93□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF573Q86YE8 665 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 OR4M1Q8NGD0 313 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 PIFOQ8TCI5 191 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 CNN2Q99439 309 aaKnown RBP14.93□□□□□ -0.02
HDAC6-231ENST00000488905 NRIP2Q9BQI9 281 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 C1orf21Q9H246 121 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 TVP23BQ9NYZ1 205 aa14.93□□□□□ -0.02
HDAC6-231ENST00000488905 NXPH2O95156 264 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 VSIG10L2P0DP72 767 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 CLVS2Q5SYC1 327 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 TMEM42Q69YG0 159 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 LHFPL4Q7Z7J7 247 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 DTX3Q8N9I9 347 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 OR2T27Q8NH04 317 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 PPP1R14AQ96A00 147 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 NKX3-1Q99801 234 aaPredicted RBP14.92□□□□□ -0.02
HDAC6-231ENST00000488905 HES4Q9HCC6 221 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 GPR173Q9NS66 373 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 OR14J1Q9UGF5 321 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 GTF2A1LQ9UNN4 478 aa14.92□□□□□ -0.02
HDAC6-231ENST00000488905 PQLC2LA1A4F0 135 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 VGLL3A8MV65 326 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 LOC110117498-PIK3R3F6TDL0 507 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 DLGAP1O14490 977 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 SRSF10O75494 262 aaKnown RBP14.91□□□□□ -0.02
HDAC6-231ENST00000488905 TK1P04183 234 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 MPZP25189 248 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 BCL2L15Q5TBC7 163 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 BATF2Q8N1L9 274 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 DNAJC9Q8WXX5 260 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 THTPAQ9BU02 230 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 ZNF702PQ9H963 129 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 V9GYS6 101 aa14.91□□□□□ -0.02
HDAC6-231ENST00000488905 FAM90A8PA6NJQ4 464 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 PIPP12273 146 aaPredicted RBP14.9□□□□□ -0.02
HDAC6-231ENST00000488905 CXCR4P61073 352 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 ESRRGP62508 458 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 CBX1P83916 185 aa14.9□□□□□ -0.02
HDAC6-231ENST00000488905 PLA1AQ53H76 456 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms