RNA–Protein interactions for RNA: ENST00000488454.5

SKA1-204, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 3 BASIC

Gene SKA1, Length 669 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-204ENST00000488454 MYL9P24844 172 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 CALRP27797 417 aaKnown RBP8.68□□□□□ -1.02
SKA1-204ENST00000488454 PMELP40967 661 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 GPR6P46095 362 aaPredicted RBP8.68□□□□□ -1.02
SKA1-204ENST00000488454 ZNF181Q2M3W8 571 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 TMEM91Q6ZNR0 172 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 ZNF826PQ6ZT77 177 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 GPR141Q7Z602 305 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 WDR86Q86TI4 376 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 ANGPTL5Q86XS5 388 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 MKXQ8IYA7 352 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 BOLLQ8N9W6 283 aaKnown RBP8.68□□□□□ -1.02
SKA1-204ENST00000488454 PNLDC1Q8NA58 520 aaKnown RBP8.68□□□□□ -1.02
SKA1-204ENST00000488454 TLNRD1Q9H1K6 362 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 SNTG1Q9NSN8 517 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 CACNG2Q9Y698 323 aa8.68□□□□□ -1.02
SKA1-204ENST00000488454 APCP25054 2843 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 TRAV8-7A0A075B6U6 113 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 LOC100506127A0A0U1RQW1 187 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 CYSRT1A8MQ03 144 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 F8W735 103 aaPredicted RBP8.67□□□□□ -1.02
SKA1-204ENST00000488454 J3QT63 122 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 RP2O75695 350 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 SC5DO75845 299 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 PLATP00750 562 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 TMEM225BP0DP42 221 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 ZNF93P35789 620 aaPredicted RBP8.67□□□□□ -1.02
SKA1-204ENST00000488454 CFHR2P36980 270 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 POU3F4P49335 361 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 PSMD7P51665 324 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 IL24Q13007 206 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 KISS1Q15726 138 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 KCNJ8Q15842 424 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 FAM27D1Q5T7N8 215 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 DDI2Q5TDH0 399 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 ARFGEF3Q5TH69 2177 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 GLT8D1Q68CQ7 371 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 C22orf42Q6IC83 251 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 ZNF529Q6P280 563 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 CD200R1LQ6Q8B3 271 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 WDR82Q6UXN9 313 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 GDPGP1Q6ZNW5 385 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 TGIF2LYQ8IUE0 185 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 C11orf53Q8IXP5 236 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 JAGN1Q8N5M9 183 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 OR52N4Q8NGI2 321 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 OR51A2Q8NGJ7 313 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 OR10Z1Q8NGY1 313 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 C10orf105Q8TEF2 133 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 LRRC29Q8WV35 223 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 AQP3Q92482 292 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 RFT1Q96AA3 541 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 FOXRED1Q96CU9 486 aaPredicted RBP8.67□□□□□ -1.02
SKA1-204ENST00000488454 ORAI1Q96D31 301 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 Q96MF0 132 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 SPACA5Q96QH8 159 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 S100A13Q99584 98 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 CHCHD6Q9BRQ6 235 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 PKIBQ9C010 78 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 FGF23Q9GZV9 251 aaPredicted RBP8.67□□□□□ -1.02
SKA1-204ENST00000488454 NPTNQ9Y639 398 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 TACC2O95359 2948 aa8.67□□□□□ -1.02
SKA1-204ENST00000488454 PPIAL4EA0A075B759 164 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 TRAV38-1A0A0B4J264 116 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 ISPDA4D126 451 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 PPIAL4DF5H284 164 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 TRAPPC2LH3BP13 241 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 PDCD5O14737 125 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 AKR7A2O43488 359 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 AIREO43918 545 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 PPIAL4FP0DN26 164 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 SLC25A16P16260 332 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 GLRA1P23415 457 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 GADD45AP24522 165 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 GIFP27352 417 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 FGF9P31371 208 aaPredicted RBP8.66□□□□□ -1.02
SKA1-204ENST00000488454 RANBP1P43487 201 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 RPL5P46777 297 aaKnown RBP8.66□□□□□ -1.02
SKA1-204ENST00000488454 GMFBP60983 142 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 BTG1P62324 171 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 PDZK1IP1Q13113 114 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 RIN1Q13671 783 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 MICBQ29980 383 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 AVPI1Q5T686 147 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 ASPHD2Q6ICH7 369 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 SLC25A26Q70HW3 274 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 LURAP1LQ8IV03 231 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 CDH26Q8IXH8 852 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 NKAIN3Q8N8D7 197 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 ZSCAN4Q8NAM6 433 aaPredicted RBP8.66□□□□□ -1.02
SKA1-204ENST00000488454 DEFB108BQ8NET1 73 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 OR13F1Q8NGS4 319 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 OR51F2Q8NH61 342 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 TNFAIP8L1Q8WVP5 186 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 YIPF6Q96EC8 236 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 KCTD7Q96MP8 289 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 FAM192AQ9GZU8 254 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 OR51E2Q9H255 320 aa8.66□□□□□ -1.02
SKA1-204ENST00000488454 PPIL3Q9H2H8 161 aaKnown RBP8.66□□□□□ -1.02
SKA1-204ENST00000488454 METTL17Q9H7H0 456 aaPredicted RBP8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms