RNA–Protein interactions for RNA: ENST00000487010.1

COL3A1-206, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 2,054 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-206ENST00000487010 FAHP16930 419 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF14P17017 642 aaPredicted RBP10.68□□□□□ -0.7
COL3A1-206ENST00000487010 RAB5AP20339 215 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 GABRR1P24046 479 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 PTGDSP41222 190 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 SUCLG1P53597 346 aaKnown RBP10.68□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF616Q08AN1 781 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 TGIF1Q15583 401 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 KRBOX4Q5JUW0 171 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 RPUSD3Q6P087 351 aaKnown RBP10.68□□□□□ -0.7
COL3A1-206ENST00000487010 SLC38A9Q8NBW4 561 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 PP6455Q8WZ26 134 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 TCEAL7Q9BRU2 100 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 CHST5Q9GZS9 411 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 EIF5A2Q9GZV4 153 aaKnown RBP10.68□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF160Q9HCG1 818 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 FGF21Q9NSA1 209 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 LUZP4Q9P127 313 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 SEMA5BQ9P283 1151 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 ANXA10Q9UJ72 324 aa10.68□□□□□ -0.7
COL3A1-206ENST00000487010 TRBV11-1A0A0K0K1C0 115 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 MSTNO14793 375 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 GPR137BO60478 399 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 IGHV2-5P01817 119 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 OR5H8P0DN80 308 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 DAOP14920 347 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 P2RY1P47900 373 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 CAMLGP49069 296 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 PIGPP57054 158 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 HNRNPKP61978 463 aaKnown RBP eCLIP10.67□□□□□ -0.7
COL3A1-206ENST00000487010 LSM6P62312 80 aaKnown RBP10.67□□□□□ -0.7
COL3A1-206ENST00000487010 TMEM187Q14656 261 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 DTX1Q86Y01 620 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 PIGTQ969N2 578 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 FBXO17Q96EF6 278 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 C20orf24Q9BUV8 137 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 LIME1Q9H400 295 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 NIT2Q9NQR4 276 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 C19orf12Q9NSK7 152 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 KCNIP3Q9Y2W7 256 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 METTL12A8MUP2 240 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 F5H5K5 113 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 DUX1O43812 170 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 HEXBP07686 556 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 TMEM225BP0DP42 221 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 KLK2P20151 261 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 LMO1P25800 156 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF133P52736 654 aaPredicted RBP10.67□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF239Q16600 458 aaKnown RBP10.67□□□□□ -0.7
COL3A1-206ENST00000487010 GPR157Q5UAW9 335 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 Q6ZSR3 168 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 TMEM156Q8N614 296 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 Q96M66 194 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 PIGQQ9BRB3 760 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 METTL7AQ9H8H3 244 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 PIGLQ9Y2B2 252 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 MYO7BQ6PIF6 2116 aa10.67□□□□□ -0.7
COL3A1-206ENST00000487010 NCOA6Q14686 2063 aaPredicted RBP10.66□□□□□ -0.7
COL3A1-206ENST00000487010 SPTBN5Q9NRC6 3674 aaKnown RBP10.66□□□□□ -0.7
COL3A1-206ENST00000487010 LOC102725191A0A1B0GVB3 256 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 hCG_1809904A0A1W2PP81 198 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 A0A1W2PR64 198 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 A0A1W2PRV1 198 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 AQP7P3A6NL99 342 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 UMAD1C9J7I0 102 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 TLX3O43711 291 aaPredicted RBP10.66□□□□□ -0.7
COL3A1-206ENST00000487010 OR5AC1P0C628 307 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 FHITP49789 147 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 RAB5CP51148 216 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 SLC35A1P78382 337 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 RHEBQ15382 184 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 SP6Q3SY56 376 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.66□□□□□ -0.7
COL3A1-206ENST00000487010 OR2M3Q8NG83 312 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 OR10G3Q8NGC4 313 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 MALSU1Q96EH3 234 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 GALNT14Q96FL9 552 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 GNRHR2Q96P88 292 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 NAA60Q9H7X0 242 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 LMAN1LQ9HAT1 526 aa10.66□□□□□ -0.7
COL3A1-206ENST00000487010 STRAPQ9Y3F4 350 aaKnown RBP10.66□□□□□ -0.7
COL3A1-206ENST00000487010 IGLV3-12A0A075B6K2 115 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 OR5H15A6NDH6 313 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 H7C1Q1 480 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 EIF1BO60739 113 aaKnown RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 ZNF728P0DKX0 622 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 MSR1P21757 451 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SFTPDP35247 375 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 LTBRP36941 435 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 EIF1P41567 113 aaKnown RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SULT1A1P50225 295 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 RRADP55042 308 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 CLDN17P56750 224 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 POLR2GP62487 172 aaKnown RBP eCLIP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 RSPO1Q2MKA7 263 aaPredicted RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 TMEM176BQ3YBM2 270 aaPredicted RBP10.65□□□□□ -0.7
COL3A1-206ENST00000487010 SZT2Q5T011 3432 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 FAM69BQ5VUD6 431 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 FAM24BQ8N5W8 94 aa10.65□□□□□ -0.7
COL3A1-206ENST00000487010 GJC3Q8NFK1 279 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms