RNA–Protein interactions for RNA: ENST00000487003.5

RAB3GAP1-204, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 3,506 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-204ENST00000487003 FOXRED1Q96CU9 486 aaPredicted RBP4.6□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RAB3CQ96E17 227 aa4.6□□□□□ -1.67
RAB3GAP1-204ENST00000487003 CXXC4Q9H2H0 198 aa4.6□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PPP1R3EQ9H7J1 279 aa4.6□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PLSCR2Q9NRY7 297 aa4.6□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ETV2O00321 342 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 SYNGR1O43759 233 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 GYPAP02724 150 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PRF1P14222 555 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RAC2P15153 192 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 VAMP1P23763 118 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ACKR3P25106 362 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PRSS3P35030 304 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 WNT5AP41221 380 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 FAM3AP98173 230 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PRB3Q04118 309 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 GRK1Q15835 563 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ABCA11PQ4W5N1 156 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ZNF782Q6ZMW2 699 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 LAX1Q8IWV1 398 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ZNF565Q8N9K5 539 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RNF138Q8WVD3 245 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ITLN2Q8WWU7 325 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 MARVELD3Q96A59 401 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 CCL13Q99616 98 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 SLC30A2Q9BRI3 323 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 BARHL1Q9BZE3 327 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RBFOX1Q9NWB1 397 aaKnown RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 NPAP1Q9NZP6 1156 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 ONECUT1Q9UBC0 465 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PRRC2AP48634 2157 aaKnown RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RFPL4AA6NLU0 287 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RFPL4AL1F8VTS6 287 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 C19orf84I3L1E1 186 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 SH2D1BO14796 132 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 WNT9BO14905 357 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PLPP2O43688 288 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 MRPS14O60783 128 aaKnown RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 PSKH1P11801 424 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 RPA2P15927 270 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 CPT2P23786 658 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 COX7A1P24310 79 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 DNASE1P24855 282 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 LGALS4P56470 323 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 CDSNQ15517 529 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 SMIM21Q3B7S5 101 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 DMKNQ6E0U4 476 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 FAHD2BQ6P2I3 314 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 GDPGP1Q6ZNW5 385 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 FAM58AQ8N1B3 248 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 C1orf162Q8NEQ5 155 aaPredicted RBP4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 NUDCD2Q8WVJ2 157 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 WBP1Q96G27 269 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 FAHD2AQ96GK7 314 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 WDR13Q9H1Z4 485 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 CNTD2Q9H8S5 307 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 FKBP14Q9NWM8 211 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 NDUFB11Q9NX14 153 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 FAM206AQ9NX38 181 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 STEAP1Q9UHE8 339 aa4.59□□□□□ -1.67
RAB3GAP1-204ENST00000487003 NCOA6Q14686 2063 aaPredicted RBP4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 CLDN25C9JDP6 229 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 NDUFB3O43676 98 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 NOS1APO75052 506 aaPredicted RBP4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 NDUFS7O75251 213 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 PTGFRP43088 359 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 CCR9P51686 369 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 FAM189A2Q15884 450 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 SLC36A1Q7Z2H8 476 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 OSR2Q8N2R0 312 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 Q8N402 240 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 SPERTQ8NA61 448 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 OR8G5Q8NG78 346 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 CASTOR1Q8WTX7 329 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 HINT2Q9BX68 163 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 SLC22A4Q9H015 551 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 OPA3Q9H6K4 179 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 ABRACLQ9P1F3 81 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 MPC1Q9Y5U8 109 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 CEPT1Q9Y6K0 416 aa4.59□□□□□ -1.68
RAB3GAP1-204ENST00000487003 MALRD1Q5VYJ5 2156 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 IGHV3OR16-10A0A075B7F0 116 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 IGHV3-43A0A0B4J1X8 118 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 TEX13DA0A0J9YY54 714 aaPredicted RBP4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 DEFB108AA8MXU0 73 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 B9A039 149 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 ENSAO43768 121 aaKnown RBP4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 IGHV3-43DP0DP04 118 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 GNB3P16520 340 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 BCL3P20749 454 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 S100GP29377 79 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 DLX5P56178 289 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 HOXA4Q00056 320 aaPredicted RBP4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 GPR176Q14439 515 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 ZNF846Q147U1 533 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 PCGF3Q3KNV8 242 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 ZNF324BQ6AW86 544 aaPredicted RBP4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 ADGRE4PQ86SQ3 457 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 NKAIN3Q8N8D7 197 aa4.58□□□□□ -1.68
RAB3GAP1-204ENST00000487003 OR56B1Q8NGI3 324 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms