RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 AWAT2Q6E213 333 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 EIF5AL1Q6IS14 154 aaKnown RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 DCXRQ7Z4W1 244 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SLC38A6Q8IZM9 456 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 WDSUB1Q8N9V3 476 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 PNLDC1Q8NA58 520 aaKnown RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 RELL2Q8NC24 303 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 CHST4Q8NCG5 386 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 KCNG3Q8TAE7 436 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SLC25A43Q8WUT9 341 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 MITD1Q8WV92 249 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 CPNE2Q96FN4 548 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 WDYHV1Q96HA8 205 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ARPC5LQ9BPX5 153 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 URM1Q9BTM9 101 aaKnown RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 SHARPINQ9H0F6 387 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 G6PC2Q9NQR9 355 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 RASL12Q9NYN1 266 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 GHRLQ9UBU3 117 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF629Q9UEG4 869 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 TNFSF18Q9UNG2 199 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 RPH3AQ9Y2J0 694 aaPredicted RBP7.88□□□□□ -1.15
COL12A1-208ENST00000486533 POLR1DQ9Y2S0 133 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 WIF1Q9Y5W5 379 aa7.88□□□□□ -1.15
COL12A1-208ENST00000486533 MEIS3P1A6NDR6 274 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 EEF1E1-BLOC1S5C9J1V9 151 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 TPD52L2O43399 206 aaKnown RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 TSPAN9O75954 239 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 SPDEFO95238 335 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 SIX6O95475 246 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 DUS4LO95620 317 aaKnown RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 PNPP00491 289 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 IGHG1P01857 330 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 APOC1P02654 83 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 TPT1P13693 172 aaKnown RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 POU3F2P20265 443 aaPredicted RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 LAP3P28838 519 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 CEACAM8P31997 349 aaPredicted RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 CLRN1P58418 232 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 GRB2P62993 217 aaKnown RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 IL13RA1P78552 427 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 POU3F1Q03052 451 aaPredicted RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 SPOCK1Q08629 439 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 MELKQ14680 651 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 PPA1Q15181 289 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 OR7A5Q15622 319 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF260Q3ZCT1 412 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 PEG10Q86TG7 708 aaKnown RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 OR56B1Q8NGI3 324 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 OR4D10Q8NGI6 311 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 OR1J2Q8NGS2 313 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 OR1S1Q8NH92 325 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 ST7LQ8TDW4 575 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 ST8SIA4Q92187 359 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 NTNG2Q96CW9 530 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 SLAMF6Q96DU3 332 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 WDR89Q96FK6 387 aaPredicted RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 TMEM185BQ9H7F4 350 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 CENPMQ9NSP4 180 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 PPP4R1LQ9P1A2 415 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 CGGBP1Q9UFW8 167 aaPredicted RBP7.87□□□□□ -1.15
COL12A1-208ENST00000486533 DKKL1Q9UK85 242 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 FBXL2Q9UKC9 423 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 PRELID1Q9Y255 219 aa7.87□□□□□ -1.15
COL12A1-208ENST00000486533 ITPR3Q14573 2671 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 MTORP42345 2549 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 MBD3L4A6NDZ8 208 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 MBD3L3A6NE82 208 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 MBD3L5A6NJ08 208 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 OR2AT4A6NND4 320 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 M0QYG6 137 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 ETV2O00321 342 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 TSPAN4O14817 238 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF735P0CB33 412 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 CTRB1P17538 263 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 ENPP1P22413 925 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 ZBTB25P24278 435 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 SRD5A2P31213 254 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 RPS27P42677 84 aaKnown RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 GUCA1AP43080 201 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 TAS2R46P59540 309 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 NAAAQ02083 359 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 SLC25A53Q5H9E4 307 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 VAX1Q5SQQ9 334 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 DCAF12L2Q5VW00 463 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 CTRB2Q6GPI1 263 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 TFAP2EQ6VUC0 442 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 MOB3CQ70IA8 216 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 OR4K17Q8NGC6 315 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 OR10K1Q8NGX5 313 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 OR10R2Q8NGX6 335 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 MBD3L2Q8NHZ7 208 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 DVL3Q92997 716 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 RNASE6Q93091 150 aaKnown RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 CXorf58Q96LI9 332 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 LINC00052Q96N35 136 aa7.86□□□□□ -1.15
COL12A1-208ENST00000486533 VRK1Q99986 396 aaPredicted RBP7.86□□□□□ -1.15
COL12A1-208ENST00000486533 ZNF471Q9BX82 626 aaPredicted RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms