RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.14■□□□□ 0.01
PRPF40A-209ENST00000486100 POM121CA8CG34 1229 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 E9PQ18 207 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 SYT7O43581 403 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 SYNGR1O43759 233 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 PGA5P0DJD9 388 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 SNRPGP62308 76 aaKnown RBP15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 ZNF85Q03923 595 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 ODF4Q2M2E3 257 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 PIP4P2Q8N4L2 257 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 CCDC54Q8NEL0 328 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 NPRL2Q8WTW4 380 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 ZNF488Q96MN9 340 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 ADI1Q9BV57 179 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 SIRT7Q9NRC8 400 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 TNFRSF19Q9NS68 423 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 POLDIP2Q9Y2S7 368 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 POMT1Q9Y6A1 747 aa15.13■□□□□ 0.01
PRPF40A-209ENST00000486100 A0A0U1RQK1 487 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 FAM181BA6NEQ2 426 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 ANKRD61A6NGH8 418 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 RFPL4AA6NLU0 287 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 RFPL4AL1F8VTS6 287 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 ENTPD6O75354 484 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 MPZP25189 248 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 ISL1P61371 349 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 GUCA2AQ02747 115 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 OCLNQ16625 522 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 SMIM21Q3B7S5 101 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 ZIK1Q3SY52 487 aaPredicted RBP15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 MEDAGQ5VYS4 303 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 SHISA2Q6UWI4 295 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 TMEM185AQ8NFB2 350 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 TBC1D15Q8TC07 691 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 SSMEM1Q8WWF3 244 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 TAF15Q92804 592 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 SLC7A11Q9UPY5 501 aa15.12■□□□□ 0.01
PRPF40A-209ENST00000486100 A0A1W2PQ09 198 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 M0R1W7 72 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 PRDX2P32119 198 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 TP53I3Q53FA7 332 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 FIP1L1Q6UN15 594 aaKnown RBP15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 FAM220AQ7Z4H9 259 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 KCTD20Q7Z5Y7 419 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 ANGPTL5Q86XS5 388 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 PRSS35Q8N3Z0 413 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 CBR4Q8N4T8 237 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 CD177Q8N6Q3 437 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 TNFRSF14Q92956 283 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 RNFT2Q96EX2 444 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 NRIP2Q9BQI9 281 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 CHIAQ9BZP6 476 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 PKIBQ9C010 78 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 UNKLQ9H9P5 680 aaKnown RBP15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 PLEKHA1Q9HB21 404 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 GNG8Q9UK08 70 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 CAB39Q9Y376 341 aaPredicted RBP15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 FAM96BQ9Y3D0 163 aa15.11■□□□□ 0.01
PRPF40A-209ENST00000486100 TRBV23-1A0A0A0MS06 115 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 RNASEK-C17orf49H0YIS7 233 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 H3BSH0 61 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 J3QRE1 110 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 EBAG9O00559 213 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 NXPH2O95156 264 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 SERPINA3P01011 423 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 CRYBA1P05813 215 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 EEF1B2P24534 225 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 IER3P46695 156 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 BLMHQ13867 455 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 UBE2V2Q15819 145 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 LDLRAD3Q86YD5 345 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 CALHM1Q8IU99 346 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 ZNF561Q8N587 486 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 RNF166Q96A37 237 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 C10orf35Q96D05 121 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 METTL8Q9H825 291 aaKnown RBP15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 ELL3Q9HB65 397 aaPredicted RBP15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 HES4Q9HCC6 221 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 MMP24Q9Y5R2 645 aa15.1■□□□□ 0.01
PRPF40A-209ENST00000486100 FAM230AA0A1W2PPH8 454 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 DAPL1A0PJW8 107 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 SNTNA6NMZ2 147 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 SLC1A7O00341 560 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 GATBO75879 557 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 UBCP0CG48 685 aaKnown RBP15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 MDKP21741 143 aaPredicted RBP15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 OMGP23515 440 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 UBE2E1P51965 193 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 FUT6P51993 359 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 CAPZA1P52907 286 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 DLX1P56177 255 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 ERVK11-1P61568 191 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 ACTC1P68032 377 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 ACTA1P68133 377 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 PRB3Q04118 309 aaPredicted RBP15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 IL24Q13007 206 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 NCR3LG1Q68D85 454 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 RDH10Q8IZV5 341 aa15.09■□□□□ 0.01
PRPF40A-209ENST00000486100 TRMT10AQ8TBZ6 339 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms