RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 OR51F2Q8NH61 342 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 SLC25A40Q8TBP6 338 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 ST8SIA4Q92187 359 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 HPS1Q92902 700 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 MARS2Q96GW9 593 aaKnown RBP12.04□□□□□ -0.48
CLK3-204ENST00000483723 ARHGAP5-AS1Q96IT6 56 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 OCSTAMPQ9BR26 566 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 PECRQ9BY49 303 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 OR51B6Q9H340 312 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 ELL3Q9HB65 397 aaPredicted RBP12.04□□□□□ -0.48
CLK3-204ENST00000483723 ZGRF1Q86YA3 2104 aa12.04□□□□□ -0.48
CLK3-204ENST00000483723 ANKRD11Q6UB99 2663 aaPredicted RBP12.03□□□□□ -0.48
CLK3-204ENST00000483723 TRAV6A0A075B6T7 132 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 IQCF6A8MYZ5 107 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 CSTBP04080 98 aaKnown RBP12.03□□□□□ -0.48
CLK3-204ENST00000483723 CD3DP04234 171 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 ZNF735P0CB33 412 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 BLVRBP30043 206 aaPredicted RBP12.03□□□□□ -0.48
CLK3-204ENST00000483723 RAD52P43351 418 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 RBPJQ06330 500 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 KLRB1Q12918 225 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 PPA1Q15181 289 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 SIGIRRQ6IA17 410 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 ELP2Q6IA86 826 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 UNQ6126/PRO20091Q6UXV3 157 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 TRAPPC6BQ86SZ2 158 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 OR4D10Q8NGI6 311 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 OR1J1Q8NGS3 322 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 NUDCD2Q8WVJ2 157 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 HIST1H2AAQ96QV6 131 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 GHITMQ9H3K2 345 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 NPDC1Q9NQX5 325 aaPredicted RBP12.03□□□□□ -0.48
CLK3-204ENST00000483723 JKAMPQ9P055 326 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 TINAGQ9UJW2 476 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 HSF4Q9ULV5 492 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 CEP295Q9C0D2 2601 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 EPG5Q9HCE0 2579 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 IGHV2OR16-5A0A0B4J2B6 119 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 OR5B21A6NL26 309 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 ZNF732B4DXR9 585 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 BOLA2-SMG1P6H3BVE0 249 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 NDUFB6O95139 128 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 CYB5AP00167 134 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 SELEP16581 610 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 MPZP25189 248 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 ERVS71-1P61550 626 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 PSG7Q13046 419 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 FAM76BQ5HYJ3 339 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 SPATA46Q5T0L3 261 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 FAAP20Q6NZ36 180 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 AKAP14Q86UN6 197 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 OSR2Q8N2R0 312 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 ZNF611Q8N823 705 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 DVL3Q92997 716 aaPredicted RBP12.03□□□□□ -0.48
CLK3-204ENST00000483723 S100PBPQ96BU1 408 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 BCL2L14Q9BZR8 327 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 PRORYQ9H606 182 aa12.03□□□□□ -0.48
CLK3-204ENST00000483723 SERPINE3A8MV23 424 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 ZNF736B4DX44 427 aaPredicted RBP12.02□□□□□ -0.49
CLK3-204ENST00000483723 RAB3DO95716 219 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 PLATP00750 562 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 SFTPBP07988 381 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 CBX5P45973 191 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 GPM6AP51674 278 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 GNG2P59768 71 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 GNG3P63215 75 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 SLC25A26Q70HW3 274 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 OR6F1Q8NGZ6 308 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 KLF14Q8TD94 323 aaPredicted RBP12.02□□□□□ -0.49
CLK3-204ENST00000483723 CCDC120Q96HB5 630 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 USB1Q9BQ65 265 aaKnown RBP12.02□□□□□ -0.49
CLK3-204ENST00000483723 C20orf85Q9H1P6 137 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 MCUBQ9NWR8 336 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 ELOVL5Q9NYP7 299 aa12.02□□□□□ -0.49
CLK3-204ENST00000483723 NOP16Q9Y3C1 178 aaKnown RBP12.02□□□□□ -0.49
CLK3-204ENST00000483723 DMXL2Q8TDJ6 3036 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 A0A0A6YYJ9 748 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 PRSS44E7EML9 344 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 KITLGP21583 273 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 CALCRP30988 508 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 RAB25P57735 213 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 NAAAQ02083 359 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 DAZAP2Q15038 168 aaPredicted RBP12.01□□□□□ -0.49
CLK3-204ENST00000483723 NHLRC3Q5JS37 347 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 ZNF782Q6ZMW2 699 aaPredicted RBP12.01□□□□□ -0.49
CLK3-204ENST00000483723 ZNF573Q86YE8 665 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 LIX1LQ8IVB5 337 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 MKXQ8IYA7 352 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 GVQW1Q8N7I0 195 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 BHLHE23Q8NDY6 225 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 ZCCHC14Q8WYQ9 949 aaKnown RBP12.01□□□□□ -0.49
CLK3-204ENST00000483723 CYYR1Q96J86 154 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 DMRTA2Q96SC8 542 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 PKIBQ9C010 78 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 OR51I2Q9H344 312 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 ETAA1Q9NY74 926 aa12.01□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A10PA6NDY2 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A18PA6NE21 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A16PA6NEW6 464 aa12□□□□□ -0.49
CLK3-204ENST00000483723 FAM90A20PA6NIJ5 464 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 420 ms