RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 GALNT14Q96FL9 552 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 SCGB3A2Q96PL1 93 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 EMC6Q9BV81 110 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 WFDC1Q9HC57 220 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 OSGIN2Q9Y236 505 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 ALG1L2C9J202 215 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 H3BML4 177 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 BCAT2O15382 392 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 PIAS2O75928 621 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 SCGNO76038 276 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 F10P00742 488 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 SOD3P08294 240 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 CXCL1P09341 107 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 AMY2BP19961 511 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 FBLP22087 321 aaKnown RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 PTGER4P35408 488 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF93P35789 620 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 PPP1CCP36873 323 aaKnown RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 SLC35A1P78382 337 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 RARRES2Q99969 163 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 SH3BGRL3Q9H299 93 aa12.57□□□□□ -0.4
COL9A2-207ENST00000482722 VSX1Q9NZR4 365 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 EP300Q09472 2414 aaPredicted RBP12.57□□□□□ -0.4
COL9A2-207ENST00000482722 A0A087X0M5 115 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 A0A1B0GX30 115 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 A8MVM7 634 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 LMO7DNF2Z398 122 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 PLPP3O14495 311 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BKO60814 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 TTRP02766 147 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BJP06899 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H1DP16402 221 aaKnown RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BOP23527 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 CHATP28329 748 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BBP33778 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 TMEM50BP56557 158 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 NXPH1P58417 271 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BDP58876 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HNRNPKP61978 463 aaKnown RBP eCLIP12.56□□□□□ -0.44e-6■■■■□ 20.5
COL9A2-207ENST00000482722 LSM6P62312 80 aaKnown RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BCP62807 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST2H2BEQ16778 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 SOHLH1Q5JUK2 328 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 GLIPR1L1Q6UWM5 242 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF248Q8NDW4 579 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 OR5D18Q8NGL1 313 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 DAZLQ92904 295 aaKnown RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BHQ93079 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BNQ99877 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 HIST1H2BMQ99879 126 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 DUSP15Q9H1R2 295 aaPredicted RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 ARV1Q9H2C2 271 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 BTBD17A6NE02 478 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 FIGNL2A6NMB9 653 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 SEC14L6B5MCN3 397 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 TERTO14746 1132 aaKnown RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 TSPAN2O60636 221 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 ANOS1P23352 680 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 OR3A2P47893 321 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 DHPSP49366 369 aaPredicted RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 SLC26A5P58743 744 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 POU3F1Q03052 451 aaPredicted RBP12.56□□□□□ -0.4
COL9A2-207ENST00000482722 ARFRP1Q13795 201 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 SSX2Q16385 188 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 KHDC3LQ587J8 217 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 TMEM156Q8N614 296 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 OR51E1Q8TCB6 317 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 Q8WTZ3 238 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 MMACHCQ9Y4U1 282 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 URGCP-MRPS24S4R325 110 aa12.56□□□□□ -0.4
COL9A2-207ENST00000482722 IGKV3D-11A0A0A0MRZ8 115 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 ZNF726A6NNF4 738 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 NPIPA5E9PKD4 350 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 MT-ATP6P00846 226 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 CHRM2P08172 466 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 GSTP1P09211 210 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 SEC11BP0C7V7 166 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 OR3A4PP47883 348 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 CXCL12P48061 93 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 SUMF2Q8NBJ7 301 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 ARHGAP5-AS1Q96IT6 56 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 C5orf34Q96MH7 638 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 SSX3Q99909 188 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 NUDT16L1Q9BRJ7 211 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 EHFQ9NZC4 300 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 NPIPA1Q9UND3 350 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 B3GALT5Q9Y2C3 310 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 CRABP1P29762 137 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 GALNSP34059 522 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 RBMXP38159 391 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 HIST3H2BBQ8N257 126 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 MFSD8Q8NHS3 518 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 FNDC9Q8TBE3 224 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 PBDC1Q9BVG4 233 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 VN1R1Q9GZP7 353 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 SMOC1Q9H4F8 434 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 UCK1Q9HA47 277 aa12.55□□□□□ -0.4
COL9A2-207ENST00000482722 MRPS17Q9Y2R5 130 aaKnown RBP12.55□□□□□ -0.4
COL9A2-207ENST00000482722 SIT1Q9Y3P8 196 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms