RNA–Protein interactions for RNA: ENST00000481708.1

SMC6-208, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 3,897 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-208ENST00000481708 ZNF425Q6IV72 752 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 APOOLQ6UXV4 268 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 VKORC1L1Q8N0U8 176 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 SLC25A45Q8N413 288 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 TEX47Q8TBZ9 253 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 TMEM54Q969K7 222 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 EEF1AKMT3Q96AZ1 226 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 COX14Q96I36 57 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 RNF145Q96MT1 663 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 ZNF599Q96NL3 588 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 DGCR6LQ9BY27 220 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 AMBNQ9NP70 447 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 SPHK2Q9NRA0 654 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 EXD2Q9NVH0 621 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 OR51B2Q9Y5P1 312 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 COX11Q9Y6N1 276 aa2.59□□□□□ -1.99
SMC6-208ENST00000481708 TINCRA0A1B0GVN0 87 aa2.59□□□□□ -2
SMC6-208ENST00000481708 PRAC2D3DTV9 90 aa2.59□□□□□ -2
SMC6-208ENST00000481708 VENTXO95231 258 aa2.59□□□□□ -2
SMC6-208ENST00000481708 NUDT3O95989 172 aa2.59□□□□□ -2
SMC6-208ENST00000481708 HLA-EP13747 358 aa2.59□□□□□ -2
SMC6-208ENST00000481708 BCL3P20749 454 aa2.59□□□□□ -2
SMC6-208ENST00000481708 CERS1P27544 350 aa2.59□□□□□ -2
SMC6-208ENST00000481708 TGFBR2P37173 567 aa2.59□□□□□ -2
SMC6-208ENST00000481708 PMELP40967 661 aa2.59□□□□□ -2
SMC6-208ENST00000481708 GDF5P43026 501 aa2.59□□□□□ -2
SMC6-208ENST00000481708 HSPA13P48723 471 aa2.59□□□□□ -2
SMC6-208ENST00000481708 RAB7AP51149 207 aa2.59□□□□□ -2
SMC6-208ENST00000481708 MFAP2P55001 183 aa2.59□□□□□ -2
SMC6-208ENST00000481708 OR2B8PP59922 312 aa2.59□□□□□ -2
SMC6-208ENST00000481708 MXD1Q05195 221 aa2.59□□□□□ -2
SMC6-208ENST00000481708 ARL16Q0P5N6 197 aa2.59□□□□□ -2
SMC6-208ENST00000481708 BSXQ3C1V8 233 aa2.59□□□□□ -2
SMC6-208ENST00000481708 FAM27D1Q5T7N8 215 aa2.59□□□□□ -2
SMC6-208ENST00000481708 TRPT1Q86TN4 253 aaKnown RBP2.59□□□□□ -2
SMC6-208ENST00000481708 GAPTQ8N292 157 aa2.59□□□□□ -2
SMC6-208ENST00000481708 ACTRT1Q8TDG2 376 aa2.59□□□□□ -2
SMC6-208ENST00000481708 PYROXD1Q8WU10 500 aa2.59□□□□□ -2
SMC6-208ENST00000481708 TMA16Q96EY4 203 aaKnown RBP2.59□□□□□ -2
SMC6-208ENST00000481708 ITCHQ96J02 903 aa2.59□□□□□ -2
SMC6-208ENST00000481708 DNAJC1Q96KC8 554 aaKnown RBP2.59□□□□□ -2
SMC6-208ENST00000481708 HSFY1Q96LI6 401 aa2.59□□□□□ -2
SMC6-208ENST00000481708 HOPXQ9BPY8 73 aaPredicted RBP2.59□□□□□ -2
SMC6-208ENST00000481708 COPS4Q9BT78 406 aa2.59□□□□□ -2
SMC6-208ENST00000481708 DCUN1D5Q9BTE7 237 aa2.59□□□□□ -2
SMC6-208ENST00000481708 CLEC7AQ9BXN2 247 aa2.59□□□□□ -2
SMC6-208ENST00000481708 HES7Q9BYE0 225 aa2.59□□□□□ -2
SMC6-208ENST00000481708 BARHL1Q9BZE3 327 aa2.59□□□□□ -2
SMC6-208ENST00000481708 LHX5Q9H2C1 402 aa2.59□□□□□ -2
SMC6-208ENST00000481708 OR51B5Q9H339 312 aa2.59□□□□□ -2
SMC6-208ENST00000481708 APC2O95996 2303 aa2.58□□□□□ -2
SMC6-208ENST00000481708 CSMD3Q7Z407 3707 aa2.58□□□□□ -2
SMC6-208ENST00000481708 HERC2O95714 4834 aa2.58□□□□□ -2
SMC6-208ENST00000481708 GOLGA6L4A6NEF3 574 aa2.58□□□□□ -2
SMC6-208ENST00000481708 EFCAB7A8K855 629 aa2.58□□□□□ -2
SMC6-208ENST00000481708 HACD1B0YJ81 288 aa2.58□□□□□ -2
SMC6-208ENST00000481708 G3V3Y1 287 aa2.58□□□□□ -2
SMC6-208ENST00000481708 KCNK1O00180 336 aa2.58□□□□□ -2
SMC6-208ENST00000481708 CDC7O00311 574 aa2.58□□□□□ -2
SMC6-208ENST00000481708 BIRC5O15392 142 aa2.58□□□□□ -2
SMC6-208ENST00000481708 IGHG1P01857 330 aa2.58□□□□□ -2
SMC6-208ENST00000481708 IL6P05231 212 aa2.58□□□□□ -2
SMC6-208ENST00000481708 CBR1P16152 277 aa2.58□□□□□ -2
SMC6-208ENST00000481708 KLK7P49862 253 aa2.58□□□□□ -2
SMC6-208ENST00000481708 MRPS11P82912 194 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 SLC9A3R2Q15599 337 aa2.58□□□□□ -2
SMC6-208ENST00000481708 RBM48Q5RL73 367 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 CPTPQ5TA50 214 aa2.58□□□□□ -2
SMC6-208ENST00000481708 SDHAF4Q5VUM1 108 aa2.58□□□□□ -2
SMC6-208ENST00000481708 WDR74Q6RFH5 385 aaPredicted RBP2.58□□□□□ -2
SMC6-208ENST00000481708 HOGA1Q86XE5 327 aa2.58□□□□□ -2
SMC6-208ENST00000481708 ITPRIPQ8IWB1 547 aa2.58□□□□□ -2
SMC6-208ENST00000481708 ENKURQ8TC29 256 aa2.58□□□□□ -2
SMC6-208ENST00000481708 LYSMD1Q96S90 227 aa2.58□□□□□ -2
SMC6-208ENST00000481708 NUDT9Q9BW91 350 aa2.58□□□□□ -2
SMC6-208ENST00000481708 NXF2Q9GZY0 626 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 RBM38Q9H0Z9 239 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 NMUR1Q9HB89 426 aa2.58□□□□□ -2
SMC6-208ENST00000481708 PRODH2Q9UF12 536 aa2.58□□□□□ -2
SMC6-208ENST00000481708 ZNF257Q9Y2Q1 563 aa2.58□□□□□ -2
SMC6-208ENST00000481708 CACNG2Q9Y698 323 aa2.58□□□□□ -2
SMC6-208ENST00000481708 MYO9AB2RTY4 2548 aa2.58□□□□□ -2
SMC6-208ENST00000481708 CR1P17927 2039 aa2.58□□□□□ -2
SMC6-208ENST00000481708 DYNC1H1Q14204 4646 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 TNXBP22105 4242 aa2.58□□□□□ -2
SMC6-208ENST00000481708 NUPL2O15504 423 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 FGF17O60258 216 aa2.58□□□□□ -2
SMC6-208ENST00000481708 TRMUO75648 421 aaKnown RBP2.58□□□□□ -2
SMC6-208ENST00000481708 HPNP05981 417 aa2.58□□□□□ -2
SMC6-208ENST00000481708 RHOCP08134 193 aa2.58□□□□□ -2
SMC6-208ENST00000481708 CELA2AP08217 269 aa2.58□□□□□ -2
SMC6-208ENST00000481708 TBPP20226 339 aa2.58□□□□□ -2
SMC6-208ENST00000481708 SUB1P53999 127 aaKnown RBP eCLIP2.58□□□□□ -22e-6■■■■■ 40.2
SMC6-208ENST00000481708 KDM4DQ6B0I6 523 aa2.58□□□□□ -2
SMC6-208ENST00000481708 COX15Q7KZN9 410 aa2.58□□□□□ -2
SMC6-208ENST00000481708 PRIMA1Q86XR5 153 aa2.58□□□□□ -2
SMC6-208ENST00000481708 Q8N402 240 aa2.58□□□□□ -2
SMC6-208ENST00000481708 OR5AP2Q8NGF4 316 aa2.58□□□□□ -2
SMC6-208ENST00000481708 OSBPL11Q9BXB4 747 aa2.58□□□□□ -2
SMC6-208ENST00000481708 C8orf4Q9NR00 106 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms